RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 FAM166BA8MTA8 275 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 PRR32B1ATL7 298 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 J3KR12 359 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 TP53I11O14683 189 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 ATG12O94817 140 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 H1F0P07305 194 aaKnown RBP6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 ZNF133P52736 654 aaPredicted RBP6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 MAXP61244 160 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 RHOBP62745 196 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 SP4Q02446 784 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 CDK10Q15131 360 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 TRMT12Q53H54 448 aaKnown RBP6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 FNDC7Q5VTL7 733 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 SP5Q6BEB4 398 aaPredicted RBP6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 SHFQ7M4L6 423 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 PIGZQ86VD9 579 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 MUC15Q8N387 334 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 PYROXD1Q8WU10 500 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 CLDN23Q96B33 292 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 PPP3R2Q96LZ3 170 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 PSMB7Q99436 277 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 URM1Q9BTM9 101 aaKnown RBP6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 ASIC5Q9NY37 505 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 PACSIN3Q9UKS6 424 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 SNX12Q9UMY4 172 aa6.37□□□□□ -1.39
PDGFRA-206ENST00000508170 MYH2Q9UKX2 1941 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 MEIOCA2RUB1 952 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 OR4C46A6NHA9 309 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 FABP7O15540 132 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 SPRY3O43610 288 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 RPL35AP18077 110 aaKnown RBP6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 PRKACGP22612 351 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 TNFSF8P32971 234 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 HRH1P35367 487 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 CDKN2BP42772 138 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 WNT4P56705 351 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 RPL27P61353 136 aaKnown RBP6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 CDK5Q00535 292 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 OR5I1Q13606 314 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 RBM39Q14498 530 aaKnown RBP6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 LRRC26Q2I0M4 334 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 TMEM78Q5T7P6 136 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 C1orf195Q5TG92 126 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 C1orf189Q5VU69 101 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 TRIM40Q6P9F5 258 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 XKRXQ6PP77 449 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 CARM1Q86X55 608 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 RDH10Q8IZV5 341 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 OR7A2PQ8NGA2 310 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 OR5AR1Q8NGP9 310 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 AGAP11Q8TF27 550 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 ACOT12Q8WYK0 555 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 PAGE5Q96GU1 130 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 LPAR4Q99677 370 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 OR51J1Q9H342 316 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 RBKSQ9H477 322 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 FNDC4Q9H6D8 234 aaPredicted RBP6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 REEP4Q9H6H4 257 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 ELL3Q9HB65 397 aaPredicted RBP6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 DHCR7Q9UBM7 475 aaKnown RBP6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 LSM5Q9Y4Y9 91 aaKnown RBP6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 PRSS21Q9Y6M0 314 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 R4GN57 208 aa6.36□□□□□ -1.39
PDGFRA-206ENST00000508170 TRGV11A0A075B6L2 103 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 IGHV2-70DA0A0C4DH43 119 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 KIR2DS3K7RE56 304 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 MBTPS2O43462 519 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 TCF21O43680 179 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 WNT1P04628 370 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 CSF3P09919 207 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 CD37P11049 281 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 RPS19P39019 145 aaKnown RBP6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 RPL3P39023 403 aaKnown RBP6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 BACE1P56817 501 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 BIKQ13323 160 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 ZNF234Q14588 700 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 LAGE3Q14657 143 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 GNMTQ14749 295 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 ZNF169Q14929 603 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 KIR2DS3Q14952 304 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 SNRNP35Q16560 246 aaKnown RBP6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 FAM153CQ494X1 144 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 HIST2H3PS2Q5TEC6 136 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 ZNF787Q6DD87 383 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 FAM231DQ6ZW35 169 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 BHLHA9Q7RTU4 235 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 PRSS41Q7RTY9 318 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 MRGPRGQ86SM5 289 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 SPICQ8N5J4 248 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 TBCKQ8TEA7 893 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 SARAFQ96BY9 339 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 LRRC58Q96CX6 371 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 SCMH1Q96GD3 660 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 KXD1Q9BQD3 176 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 MYH14Q7Z406 1995 aaKnown RBP6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 IDSB3KWA1 339 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 K7EMT4 169 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 ZNF593O00488 134 aaPredicted RBP6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 MFSD11O43934 449 aa6.35□□□□□ -1.39
PDGFRA-206ENST00000508170 TPST1O60507 370 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms