RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 Q96MT0 163 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 ZNF649Q9BS31 505 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 MAP1LC3CQ9BXW4 147 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 MS4A8Q9BY19 250 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 STMN4Q9H169 189 aaPredicted RBP1.78□□□□□ -2.12
LSM6-205ENST00000507449 GAL3ST2Q9H3Q3 398 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 CSNK1G1Q9HCP0 422 aa1.78□□□□□ -2.12
LSM6-205ENST00000507449 RPRD2Q5VT52 1461 aaKnown RBP1.77□□□□□ -2.13
LSM6-205ENST00000507449 JCADQ9P266 1359 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 GOLGA8JA6NMD2 632 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 CENPBD1B2RD01 187 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 K7EN84 100 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 MYL12BO14950 172 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 IGKV1-17P01599 117 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 MMP7P09237 267 aaPredicted RBP1.77□□□□□ -2.13
LSM6-205ENST00000507449 GOLGA8HP0CJ92 632 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 PRSS3P35030 304 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 PSMC5P62195 406 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 GRB2P62993 217 aaKnown RBP1.77□□□□□ -2.13
LSM6-205ENST00000507449 IFFO1Q0D2I5 559 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 ST3GAL4Q11206 333 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 WDR43Q15061 677 aaKnown RBP eCLIP1.77□□□□□ -2.13
LSM6-205ENST00000507449 IGFBP7Q16270 282 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 LINC00303Q3SY05 128 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 ZNF678Q5SXM1 525 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 FAM27D1Q5T7N8 215 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 SLC25A25Q6KCM7 469 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 MED27Q6P2C8 311 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 MORN3Q6PF18 240 aaPredicted RBP1.77□□□□□ -2.13
LSM6-205ENST00000507449 TBPL2Q6SJ96 375 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 SETD3Q86TU7 594 aaPredicted RBP1.77□□□□□ -2.13
LSM6-205ENST00000507449 OR5M1Q8NGP8 315 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 OR6K6Q8NGW6 343 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 OR52N1Q8NH53 320 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 OR1S1Q8NH92 325 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 TNFRSF14Q92956 283 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 FAM131CQ96AQ9 280 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 SNF8Q96H20 258 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 CENPNQ96H22 339 aaPredicted RBP1.77□□□□□ -2.13
LSM6-205ENST00000507449 TSNAXQ99598 290 aaKnown RBP1.77□□□□□ -2.13
LSM6-205ENST00000507449 DDIT4Q9NX09 232 aa1.77□□□□□ -2.13
LSM6-205ENST00000507449 IGKV1D-17A0A075B6S4 117 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 FAM240AA0A1B0GVK7 77 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 TMEM72A0PK05 275 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 TVP23AA6NH52 213 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 ZNF233A6NK53 670 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 VGLL3A8MV65 326 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 CNMDO75829 334 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 RNASE2P10153 161 aaKnown RBP1.76□□□□□ -2.13
LSM6-205ENST00000507449 HOXB8P17481 243 aaPredicted RBP1.76□□□□□ -2.13
LSM6-205ENST00000507449 CD9P21926 228 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 P2RY2P41231 377 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 XIAPP98170 497 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 C2orf54Q08AI8 447 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 DYNC1I2Q13409 638 aaKnown RBP1.76□□□□□ -2.13
LSM6-205ENST00000507449 MAD2L1BPQ15013 274 aaPredicted RBP1.76□□□□□ -2.13
LSM6-205ENST00000507449 TAL2Q16559 108 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 FBXL19-AS1Q494R0 122 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 HHATQ5VTY9 493 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 DUPD1Q68J44 220 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 APOBEC3HQ6NTF7 200 aaKnown RBP1.76□□□□□ -2.13
LSM6-205ENST00000507449 BBS7Q8IWZ6 715 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 ZNF420Q8TAQ5 688 aaPredicted RBP1.76□□□□□ -2.13
LSM6-205ENST00000507449 NDNFQ8TB73 568 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 MITD1Q8WV92 249 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 ING5Q8WYH8 240 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 HGDQ93099 445 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 RNF170Q96K19 258 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 PORCNQ9H237 461 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 IFNKQ9P0W0 207 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 RWDD2AQ9UIY3 292 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 TFR2Q9UP52 801 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 FLVCR2Q9UPI3 526 aa1.76□□□□□ -2.13
LSM6-205ENST00000507449 BRCA1P38398 1863 aaKnown RBP1.75□□□□□ -2.13
LSM6-205ENST00000507449 MROH5Q6ZUA9 1318 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 GPR179Q6PRD1 2367 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 TRAV8-7A0A075B6U6 113 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 ANKRD20A5PA0PJZ0 165 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 ISPDA4D126 451 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 A8MWL6 223 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 PRAMEF26H0Y7S4 382 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 BOLA2-SMG1P6H3BVE0 249 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 CLDN34H7C241 214 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 RFXANKO14593 260 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 NDUFS5O43920 106 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 ALOX12BO75342 701 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 SCO1O75880 301 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 MAS1P04201 325 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 OR5AL1P0C617 328 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 LIPCP11150 499 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 PTNP21246 168 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 HTR2CP28335 458 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 MPV17P39210 176 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 IDH2P48735 452 aaKnown RBP1.75□□□□□ -2.13
LSM6-205ENST00000507449 C6orf183Q5T699 404 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 SPINT4Q6UDR6 99 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 TMEM136Q6ZRR5 245 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 PRNTQ86SH4 94 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 PDPNQ86YL7 162 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 LINC00469Q8N7U9 141 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms