RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 CLEC2DQ9UHP7 191 aa16.63■□□□□ 0.25
SNX25-204ENST00000506896 SLC7A11Q9UPY5 501 aa16.63■□□□□ 0.25
SNX25-204ENST00000506896 SRRM5B3KS81 715 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 H3BSH0 61 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 FOXH1O75593 365 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 RPS2P15880 293 aaKnown RBP16.62■□□□□ 0.25
SNX25-204ENST00000506896 MUC1P15941 1255 aaPredicted RBP16.62■□□□□ 0.25
SNX25-204ENST00000506896 ZNF20P17024 532 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 CDK5R1Q15078 307 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 RNLSQ5VYX0 342 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 TEX36Q5VZQ5 186 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 UTS2BQ765I0 119 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 OR13C3Q8NGS6 347 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 ZNF671Q8TAW3 534 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 C12orf43Q96C57 262 aaKnown RBP16.62■□□□□ 0.25
SNX25-204ENST00000506896 LPAR3Q9UBY5 353 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 ERGIC3Q9Y282 383 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 LRCH1Q9Y2L9 728 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 TPRKBQ9Y3C4 175 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 DNHD1Q96M86 4753 aa16.62■□□□□ 0.25
SNX25-204ENST00000506896 COL6A5A8TX70 2615 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 PQLC2LA1A4F0 135 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 C3orf80F5H4A9 247 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 MYL12BO14950 172 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 PLPP2O43688 288 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 CDK1P06493 297 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 WNT2P09544 360 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 FAM157CP0CG43 387 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 C21orf33P30042 268 aaPredicted RBP16.61■□□□□ 0.25
SNX25-204ENST00000506896 CD80P33681 288 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 GTF2A1P52655 376 aaPredicted RBP16.61■□□□□ 0.25
SNX25-204ENST00000506896 TAS2R43P59537 309 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 CNN3Q15417 329 aaKnown RBP16.61■□□□□ 0.25
SNX25-204ENST00000506896 MICBQ29980 383 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 ESCO2Q56NI9 601 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 SFRP4Q6FHJ7 346 aaPredicted RBP16.61■□□□□ 0.25
SNX25-204ENST00000506896 HAGHLQ6PII5 290 aaPredicted RBP16.61■□□□□ 0.25
SNX25-204ENST00000506896 DEFB108BQ8NET1 73 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 OR8B3Q8NGG8 313 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 RPS4Y2Q8TD47 263 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 GATAD2BQ8WXI9 593 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 FGGYQ96C11 551 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 NEIL1Q96FI4 390 aaPredicted RBP16.61■□□□□ 0.25
SNX25-204ENST00000506896 OR8B2Q96RD0 313 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 ZNF184Q99676 751 aaPredicted RBP16.61■□□□□ 0.25
SNX25-204ENST00000506896 PDCD1LG2Q9BQ51 273 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 BEX2Q9BXY8 128 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 METTL17Q9H7H0 456 aaPredicted RBP16.61■□□□□ 0.25
SNX25-204ENST00000506896 LPAR2Q9HBW0 351 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 HIF1ANQ9NWT6 349 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 ERVK-18Q9QC07 812 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 POLDIP2Q9Y2S7 368 aa16.61■□□□□ 0.25
SNX25-204ENST00000506896 A8MXK9 166 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 PTGES3LE9PB15 166 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 J3QT63 122 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 OGG1O15527 345 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 RRP9O43818 475 aaKnown RBP16.6■□□□□ 0.25
SNX25-204ENST00000506896 GATA3P23771 443 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 HAAOP46952 286 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 FUT6P51993 359 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 UBE2V2Q15819 145 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 DMRTC1Q5HYR2 192 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 FAM120AOSQ5T036 256 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 ZNF485Q8NCK3 441 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 C19orf18Q8NEA5 215 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 DNAAF1Q8NEP3 725 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 OR51A4Q8NGJ6 313 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 AQP3Q92482 292 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 SMIM19Q96E16 107 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 ADAT3Q96EY9 351 aaPredicted RBP16.6■□□□□ 0.25
SNX25-204ENST00000506896 SHARPINQ9H0F6 387 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 Q9H521 79 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 DHDHQ9UQ10 334 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 POLR3KQ9Y2Y1 108 aaPredicted RBP16.6■□□□□ 0.25
SNX25-204ENST00000506896 PCDHGB5Q9Y5G0 923 aa16.6■□□□□ 0.25
SNX25-204ENST00000506896 PPIAL4CA0A0B4J2A2 164 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 EGR1P18146 543 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 HNF1AP20823 631 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 WNT4P56705 351 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 SLC35A2P78381 396 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 XAF1Q6GPH4 301 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 NANOGP1Q8N7R0 232 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 OR10AC1Q8NH08 325 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 SPSB1Q96BD6 273 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 CNBD2Q96M20 576 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 MDFIQ99750 246 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 MND1Q9BWT6 205 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 SSBP3Q9BWW4 388 aaPredicted RBP16.59■□□□□ 0.25
SNX25-204ENST00000506896 CDCA4Q9BXL8 241 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 NEK6Q9HC98 313 aa16.59■□□□□ 0.25
SNX25-204ENST00000506896 A0A0G2JMP0 313 aa16.58■□□□□ 0.24
SNX25-204ENST00000506896 A0A0X1KG70 313 aa16.58■□□□□ 0.24
SNX25-204ENST00000506896 OCM2P0CE71 109 aa16.58■□□□□ 0.24
SNX25-204ENST00000506896 OCMP0CE72 109 aaPredicted RBP16.58■□□□□ 0.24
SNX25-204ENST00000506896 PRKACBP22694 351 aa16.58■□□□□ 0.24
SNX25-204ENST00000506896 PITPNBP48739 271 aa16.58■□□□□ 0.24
SNX25-204ENST00000506896 NPY4RP50391 375 aa16.58■□□□□ 0.24
SNX25-204ENST00000506896 LCN2P80188 198 aa16.58■□□□□ 0.24
SNX25-204ENST00000506896 FAM90A1Q86YD7 464 aa16.58■□□□□ 0.24
SNX25-204ENST00000506896 SERPINA12Q8IW75 414 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms