RNA–Protein interactions for RNA: ENST00000506556.1

THUMPD3P1-201, Transcript of THUMP domain containing 3 pseudogene 1, humanhuman

BASIC

Gene THUMPD3P1, Length 1,480 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3P1-201ENST00000506556 ZNF430Q9H8G1 570 aaPredicted RBP2.87□□□□□ -1.95
THUMPD3P1-201ENST00000506556 RHOFQ9HBH0 211 aa2.87□□□□□ -1.95
THUMPD3P1-201ENST00000506556 MEPEQ9NQ76 525 aaPredicted RBP2.87□□□□□ -1.95
THUMPD3P1-201ENST00000506556 DHRS4-AS1Q9P1J3 65 aa2.87□□□□□ -1.95
THUMPD3P1-201ENST00000506556 ARMCX1Q9P291 453 aa2.87□□□□□ -1.95
THUMPD3P1-201ENST00000506556 Q9UF83 564 aa2.87□□□□□ -1.95
THUMPD3P1-201ENST00000506556 ING4Q9UNL4 249 aa2.87□□□□□ -1.95
THUMPD3P1-201ENST00000506556 RPL36Q9Y3U8 105 aaKnown RBP2.87□□□□□ -1.95
THUMPD3P1-201ENST00000506556 ARL5AQ9Y689 179 aa2.87□□□□□ -1.95
THUMPD3P1-201ENST00000506556 USH1CQ9Y6N9 552 aa2.87□□□□□ -1.95
THUMPD3P1-201ENST00000506556 RGPD1P0DJD0 1748 aa2.87□□□□□ -1.95
THUMPD3P1-201ENST00000506556 COL14A1Q05707 1796 aaKnown RBP2.87□□□□□ -1.95
THUMPD3P1-201ENST00000506556 RALGAPA1Q6GYQ0 2036 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 ABCA3Q99758 1704 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 LMO7Q8WWI1 1683 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 CPSF1Q10570 1443 aaKnown RBP2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 EIF3AQ14152 1382 aaKnown RBP2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 CEMIPQ8WUJ3 1361 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 TRAV9-2A0A087WT02 112 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 A0A1B0GV72 72 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 TINCRA0A1B0GVN0 87 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 ZNF233A6NK53 670 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 USP27XA6NNY8 438 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 SRRM5B3KS81 715 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 KCNK1O00180 336 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 GABRPO00591 440 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 NME4O00746 187 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 CDIPTO14735 213 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 UBDO15205 165 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 SSNA1O43805 119 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 UGT1A9O60656 530 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 ZNF354AO60765 605 aaPredicted RBP2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 VENTXO95231 258 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 IFNA21P01568 189 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 WNT2P09544 360 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 TFPTP0C1Z6 253 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 IGFBP3P17936 291 aaPredicted RBP2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 TCP1P17987 556 aaKnown RBP2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 BCL3P20749 454 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 FUT3P21217 361 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 KRTAP5-9P26371 169 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 STC1P52823 247 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 FGF8P55075 233 aaPredicted RBP2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 DSCR10P59022 87 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 STXBP1P61764 594 aaKnown RBP2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 SEMG2Q02383 582 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 TGFBR3Q03167 851 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 ECH1Q13011 328 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 PGGHGQ32M88 737 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 SLC25A30Q5SVS4 291 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 FRMPD2BQ6IN97 320 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 ZNF544Q6NX49 715 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 TRIM40Q6P9F5 258 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 CD200R1LQ6Q8B3 271 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 EPGNQ6UW88 154 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 MBOAT2Q6ZWT7 520 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 TMED4Q7Z7H5 227 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 LYG2Q86SG7 212 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 IFNEQ86WN2 208 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 OR6V1Q8N148 313 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 C12orf29Q8N999 325 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 OR8G5Q8NG78 346 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 OR10X1Q8NGY0 326 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 RHOXF1Q8NHV9 184 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 RFESDQ8TAC1 157 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 RNF138Q8WVD3 245 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 TRUB1Q8WWH5 349 aaKnown RBP2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 MRPS31Q92665 395 aaKnown RBP2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 SORT1Q99523 831 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 UGT1A8Q9HAW9 530 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 ZNF225Q9UK10 706 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 RAB26Q9ULW5 256 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 PSG11Q9UQ72 335 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 NDUFAF1Q9Y375 327 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 PEAK1Q9H792 1746 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 PLCH1Q4KWH8 1693 aa2.86□□□□□ -1.95
THUMPD3P1-201ENST00000506556 CRB1P82279 1406 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 ZNF729A6NN14 1252 aaPredicted RBP2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 ANKRD63C9JTQ0 380 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 H7C2Y5 167 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 MBTPS2O43462 519 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 KLRC4O43908 158 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 FADS1O60427 444 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 CDC40O60508 579 aaKnown RBP eCLIP2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 RAMP1O60894 148 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 FKBP6O75344 327 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 ZNF253O75346 499 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 RLN2P04090 185 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 HOXC4P09017 264 aaPredicted RBP2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 TACSTD2P09758 323 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 RBMY1CP0DJD4 496 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 HIST1H1EP10412 219 aaKnown RBP2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 THRAP10827 490 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 KCNE1P15382 129 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 ZNF250P15622 560 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 SDC1P18827 310 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 SERPINA2P20848 420 aa2.85□□□□□ -1.95
THUMPD3P1-201ENST00000506556 F8A1P23610 371 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms