RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 AZGP1P25311 298 aaKnown RBP6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 INSL4Q14641 139 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 LIPKQ5VXJ0 399 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 LINC00596Q86U02 117 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM89BQ8N5H3 189 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 SDSLQ96GA7 329 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 TMUB1Q9BVT8 246 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 DHDHQ9UQ10 334 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 PMF1-BGLAPU3KQ54 211 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 ABCA4P78363 2273 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 CUBNO60494 3623 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 PLCE1Q9P212 2302 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A10PA6NDY2 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A18PA6NE21 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A16PA6NEW6 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A20PA6NIJ5 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A8PA6NJQ4 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A7PA6NKC0 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 ANKRD30BLA7E2S9 258 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 POM121CA8CG34 1229 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A22PA8MWA6 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A12PA8MX19 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A5PA8MXJ8 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A23PA8MXZ1 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 TBX1O43435 398 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A15PP0C7V4 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A13PP0C7W8 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A14PP0C7W9 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM90A24PP0C7X0 464 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 CELP19835 753 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 AMY2BP19961 511 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 TMEM33P57088 247 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 LY6G5BQ8NDX9 201 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR51A2Q8NGJ7 313 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR5D14Q8NGL3 314 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZNF420Q8TAQ5 688 aaPredicted RBP6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 TBC1D15Q8TC07 691 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 MSL2Q9HCI7 577 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.94□□□□□ -1.31e-6■■■■□ 23.3
CDC42SE2-208ENST00000505065 TAS2R4Q9NYW5 299 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 CEPT1Q9Y6K0 416 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 IGHV1-69-2A0A0G2JMI3 117 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 TMEM14DPA8MWL7 114 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 HLA-DPB1P04440 258 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 SLC25A16P16260 332 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 EGR1P18146 543 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 SRMP19623 302 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 NR4A2P43354 598 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 TMBIM6P55061 237 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 LMO4P61968 165 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 PDZK1IP1Q13113 114 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR8G1Q15617 311 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 Q6P435 159 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 ITLN1Q8WWA0 313 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 TMEM106AQ96A25 262 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 NOX4Q9NPH5 578 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 MTCH1Q9NZJ7 389 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 GHRLQ9UBU3 117 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 LAMP3Q9UQV4 416 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 CELSR1Q9NYQ6 3014 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 GGT3PA6NGU5 568 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 DAOP14920 347 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 CCNOP22674 350 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 BMXP51813 675 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 TNFAIP6P98066 277 aaPredicted RBP6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 BLMHQ13867 455 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 MED22Q15528 200 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 ELMOD3Q96FG2 381 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 TMEM138Q9NPI0 162 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 TMEM106BQ9NUM4 274 aa6.94□□□□□ -1.3
CDC42SE2-208ENST00000505065 TNFRSF1AP19438 455 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZFP41Q8N8Y5 198 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 FOXRED1Q96CU9 486 aaPredicted RBP6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 CMTM3Q96MX0 182 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 FN3KRPQ9HA64 309 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 TMEM160Q9NX00 188 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 FSHBP01225 129 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 MUC1P15941 1255 aaPredicted RBP6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 SELENOVP59797 346 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 MPPED2Q15777 294 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 ACP7Q6ZNF0 438 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 BIVMQ86UB2 503 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZNF573Q86YE8 665 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 ZNF676Q8N7Q3 588 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 FUNDC2Q9BWH2 189 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 TPK1Q9H3S4 243 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 NPTNQ9Y639 398 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 NDUFS7O75251 213 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 KNG1P01042 644 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 CSN2P05814 226 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 RPL5P46777 297 aaKnown RBP6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR2W3Q7Z3T1 314 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 Q8IYB0 196 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 OR52N4Q8NGI2 321 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 ANGPTL6Q8NI99 470 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 TMIGD2Q96BF3 282 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 FAM71F1Q96KD3 344 aaPredicted RBP6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 CADP27708 2225 aa6.93□□□□□ -1.3
CDC42SE2-208ENST00000505065 MEGF11A6BM72 1044 aa6.92□□□□□ -1.3
CDC42SE2-208ENST00000505065 A6NHS1 94 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms