RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 SCGB1C2P0DMR2 95 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 ATF1P18846 271 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 KIR3DL1P43629 444 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 TGIF1Q15583 401 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 CTU1Q7Z7A3 348 aaKnown RBP5.59□□□□□ -1.51
CLCN3-204ENST00000504131 RDH5Q92781 318 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 KHSRPQ92945 711 aaKnown RBP eCLIP5.59□□□□□ -1.515e-7■■■□□ 16.1
CLCN3-204ENST00000504131 FLYWCH2Q96CP2 140 aaKnown RBP5.59□□□□□ -1.51
CLCN3-204ENST00000504131 SLC6A18Q96N87 628 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 DEFB118Q96PH6 123 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 CSF3RQ99062 836 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF337Q9Y3M9 751 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 NRAPQ86VF7 1730 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 A0A1B0GU03 582 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 OR1F1O43749 312 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 EFEMP2O95967 443 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 CTSDP07339 412 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-204ENST00000504131 PGA4P0DJD7 388 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 PGA5P0DJD9 388 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 ATP1B2P14415 290 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-204ENST00000504131 MTNR1BP49286 362 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 OR1D5P58170 312 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 MEF2DQ14814 521 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 PAFAH1B3Q15102 231 aaKnown RBP5.59□□□□□ -1.51
CLCN3-204ENST00000504131 SIX1Q15475 284 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-204ENST00000504131 CLEC12BQ2HXU8 276 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 CLEC20AQ6ZU45 233 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 IGDCC3Q8IVU1 814 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 HIST1H2AAQ96QV6 131 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 SLC30A3Q99726 388 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 MUTYHQ9UIF7 546 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 VAX2Q9UIW0 290 aa5.59□□□□□ -1.51
CLCN3-204ENST00000504131 OR5B21A6NL26 309 aa5.59□□□□□ -1.52
CLCN3-204ENST00000504131 CD22P20273 847 aa5.59□□□□□ -1.52
CLCN3-204ENST00000504131 CFHR2P36980 270 aa5.59□□□□□ -1.52
CLCN3-204ENST00000504131 PPP2CAP67775 309 aa5.59□□□□□ -1.52
CLCN3-204ENST00000504131 ELOBQ15370 118 aa5.59□□□□□ -1.52
CLCN3-204ENST00000504131 TMEM241Q24JQ0 296 aa5.59□□□□□ -1.52
CLCN3-204ENST00000504131 UNQ6494/PRO21346Q6UXR6 183 aa5.59□□□□□ -1.52
CLCN3-204ENST00000504131 OR51G2Q8NGK0 314 aa5.59□□□□□ -1.52
CLCN3-204ENST00000504131 LPAR4Q99677 370 aa5.59□□□□□ -1.52
CLCN3-204ENST00000504131 OR2H1Q9GZK4 316 aa5.59□□□□□ -1.52
CLCN3-204ENST00000504131 NPFFR1Q9GZQ6 430 aa5.59□□□□□ -1.52
CLCN3-204ENST00000504131 GJD2Q9UKL4 321 aa5.59□□□□□ -1.52
CLCN3-204ENST00000504131 UBR2Q8IWV8 1755 aa5.59□□□□□ -1.52
CLCN3-204ENST00000504131 FAM181BA6NEQ2 426 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 CHST1O43916 411 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 COX7A2P14406 83 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 POLR2IP36954 125 aaKnown RBP5.58□□□□□ -1.52
CLCN3-204ENST00000504131 ID3Q02535 119 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 SPHARQ15513 63 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 PSG3Q16557 428 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 LYG1Q8N1E2 194 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 HIST3H2BBQ8N257 126 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 TEX26Q8N6G2 289 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 OR5AP2Q8NGF4 316 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 OR10AG1Q8NH19 301 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 PTX4Q96A99 478 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 PNPLA2Q96AD5 504 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 UPRTQ96BW1 309 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 YIPF6Q96EC8 236 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 ACY3Q96HD9 319 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 PARP12Q9H0J9 701 aaKnown RBP5.58□□□□□ -1.52
CLCN3-204ENST00000504131 POLR2J3Q9H1A7 115 aaKnown RBP5.58□□□□□ -1.52
CLCN3-204ENST00000504131 SLC35B3Q9H1N7 401 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 FZD8Q9H461 694 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 ENTPD2Q9Y5L3 495 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 BCL9LQ86UU0 1499 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 LOC285095A0A1B0GVY8 99 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 SLC38A8A6NNN8 435 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 TMEM262E9PQX1 116 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 GSTZ1O43708 216 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-204ENST00000504131 KLK8O60259 260 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 OR1I1O60431 355 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 IL2RAP01589 272 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 MMP16P51512 607 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 FXYD6P3P58550 94 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 HERV-K104P61576 105 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 C1orf186Q6ZWK4 172 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 MON1BQ7L1V2 547 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 CALHM3Q86XJ0 350 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 SIAH3Q8IW03 269 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 B3GNT7Q8NFL0 401 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 OR10V1Q8NGI7 309 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 HSH2DQ96JZ2 352 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 FEVQ99581 238 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 SPANXB1Q9NS25 103 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-204ENST00000504131 CARHSP1Q9Y2V2 147 aaKnown RBP5.58□□□□□ -1.52
CLCN3-204ENST00000504131 HEBP2Q9Y5Z4 205 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 A0A1W2PRF3 423 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 A0A1W2PRM7 423 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 M0QYG6 137 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 DDAH2O95865 285 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 EN2P19622 333 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-204ENST00000504131 ADRA1AP35348 466 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 CCR2P41597 374 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 PDLIM4P50479 330 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 FUT6P51993 359 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 EFNB1P98172 346 aa5.58□□□□□ -1.52
CLCN3-204ENST00000504131 APOOLQ6UXV4 268 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms