RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 VGLL3A8MV65 326 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 H0Y980 276 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 H7C1H1 209 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 M0QZ92 97 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 XKRYO14609 159 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 FGF16O43320 207 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 SYNGR1O43759 233 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 RAD1O60671 282 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 UGT2B11O75310 529 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 RDH16O75452 317 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 MPZL1O95297 269 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 NSA2O95478 260 aaKnown RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ATP6V1G2O95670 118 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 PTTG1O95997 202 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ASS1P00966 412 aaKnown RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 IFNA5P01569 189 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 IFNA6P05013 189 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 EIF4EP06730 217 aaKnown RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 IGHV3-43DP0DP04 118 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 COX5BP10606 129 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF7P17097 686 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 MDKP21741 143 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLCO1A2P46721 670 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 RPS9P46781 194 aaKnown RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 RPS10P46783 165 aaKnown RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 GALR1P47211 349 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 TTPAP49638 278 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 GDI2P50395 445 aaKnown RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ERFP50548 548 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 DLX6P56179 175 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 RAB38P57729 211 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ACTBP60709 375 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 RPS21P63220 83 aaKnown RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ACTG1P63261 375 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 MGAT3Q09327 533 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 CASP8Q14790 479 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR1Q1Q15612 314 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 MPPED2Q15777 294 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZSCAN26Q16670 478 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 CEACAM21Q3KPI0 293 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 LRRC10Q5BKY1 277 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 LCN12Q6JVE5 192 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 MED27Q6P2C8 311 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 EPGNQ6UW88 154 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 IGFL2Q6UWQ7 119 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 TEX43Q6ZNM6 134 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 C10orf107Q8IVU9 208 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 C10orf67Q8IYJ2 551 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF786Q8N393 782 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 C2orf73Q8N5S3 287 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 METTL13Q8N6R0 699 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZFP41Q8N8Y5 198 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR4K2Q8NGD2 314 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR10J6PQ8NGY7 276 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR4S2Q8NH73 311 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR2AE1Q8NHA4 323 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 SYNPRQ8TBG9 265 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ACTL9Q8TC94 416 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 LRRC29Q8WV35 223 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 PTH2Q96A98 100 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 NTAN1Q96AB6 310 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 DCPSQ96C86 337 aaKnown RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 DDIT4LQ96D03 193 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZMYND19Q96E35 227 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 MRAP2Q96G30 205 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF488Q96MN9 340 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 RNF145Q96MT1 663 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 LINC00167Q96N53 147 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 RDH12Q96NR8 316 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 RBP7Q96R05 134 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR2M2Q96R28 347 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 GABRG3Q99928 467 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 C20orf144Q9BQM9 153 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 SULT4A1Q9BR01 284 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 PARP12Q9H0J9 701 aaKnown RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 LHX5Q9H2C1 402 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ARV1Q9H2C2 271 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 MFSD1Q9H3U5 465 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 CLMPQ9H6B4 373 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 RHOFQ9HBH0 211 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 HRASLSQ9HDD0 168 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 MYOZ1Q9NP98 299 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 MED4Q9NPJ6 270 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF331Q9NQX6 463 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 FBXO8Q9NRD0 319 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 FBXO6Q9NRD1 293 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 COMMD9Q9P000 198 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 NUFIP1Q9UHK0 495 aaKnown RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 RAB22AQ9UL26 194 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC22A13Q9Y226 551 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 PRELID1Q9Y255 219 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF257Q9Y2Q1 563 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 SAMHD1Q9Y3Z3 626 aaKnown RBP1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 TTC21AQ8NDW8 1320 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 RLFQ13129 1914 aa1.6□□□□□ -2.15
HMGB1P35-201ENST00000503360 PDS5BQ9NTI5 1447 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 IGLV1-36A0A0B4J1U3 117 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 F5H5K5 113 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 LINC01619G3V211 115 aa1.59□□□□□ -2.15
HMGB1P35-201ENST00000503360 H7C417 338 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms