RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 IFT46Q9NQC8 304 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 HIF1ANQ9NWT6 349 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 SLC5A6Q9Y289 635 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 LGALS8O00214 317 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 SULT1C2O00338 296 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 ARPC1BO15143 372 aaKnown RBP10.14□□□□□ -0.79
USP46-204ENST00000503060 PRAF2O60831 178 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 GPX4P36969 197 aaPredicted RBP10.14□□□□□ -0.79
USP46-204ENST00000503060 VEGFCP49767 419 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 SSBP1Q04837 148 aaKnown RBP10.14□□□□□ -0.79
USP46-204ENST00000503060 TRIP6Q15654 476 aaKnown RBP10.14□□□□□ -0.79
USP46-204ENST00000503060 BEST4Q8NFU0 473 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 LRRC20Q8TCA0 184 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 HAS2Q92819 552 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 FBXW5Q969U6 566 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 SLAMF9Q96A28 289 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 MARS2Q96GW9 593 aaKnown RBP10.14□□□□□ -0.79
USP46-204ENST00000503060 GAL3ST2Q9H3Q3 398 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 NOX3Q9HBY0 568 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 PEF1Q9UBV8 284 aaKnown RBP10.14□□□□□ -0.79
USP46-204ENST00000503060 RAB22AQ9UL26 194 aa10.14□□□□□ -0.79
USP46-204ENST00000503060 WDFY3Q8IZQ1 3526 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 AHCTF1Q8WYP5 2266 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 C5orf63A6NC05 138 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 MEIS3P1A6NDR6 274 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 E9PLN8 166 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 SMLR1H3BR10 107 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 NDUFB6O95139 128 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 PMPCAQ10713 525 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 AIMP2Q13155 320 aaKnown RBP10.13□□□□□ -0.79
USP46-204ENST00000503060 OR1C1Q15619 314 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 FAM27BQ5VT28 67 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 PGAP1Q75T13 922 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 AAED1Q7RTV5 226 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 NAA40Q86UY6 237 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 ZNF573Q86YE8 665 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 OR5AS1Q8N127 324 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 SUMF1Q8NBK3 374 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 OR5D18Q8NGL1 313 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 OR4C16Q8NGL9 310 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 SEH1LQ96EE3 360 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 IP6K3Q96PC2 410 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 HES7Q9BYE0 225 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 ZNF703Q9H7S9 590 aaPredicted RBP10.13□□□□□ -0.79
USP46-204ENST00000503060 PLSCR3Q9NRY6 295 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 F5H5K5 113 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 IGLV3-1P01715 115 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 HPNP05981 417 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 AKAIN1P0CW23 69 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 GTF2F2P13984 249 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 QRFPP83859 136 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 RSPO1Q2MKA7 263 aaPredicted RBP10.13□□□□□ -0.79
USP46-204ENST00000503060 PAQR4Q8N4S7 273 aaPredicted RBP10.13□□□□□ -0.79
USP46-204ENST00000503060 OR14K1Q8NGZ2 314 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 MRGPRFQ96AM1 343 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 FBXO17Q96EF6 278 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 MS4A3Q96HJ5 214 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 RANBP3Q9H6Z4 567 aaPredicted RBP10.13□□□□□ -0.79
USP46-204ENST00000503060 PLA2G3Q9NZ20 509 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 B4GALT7Q9UBV7 327 aa10.13□□□□□ -0.79
USP46-204ENST00000503060 NCOA6Q14686 2063 aaPredicted RBP10.12□□□□□ -0.79
USP46-204ENST00000503060 A0A1B0GUH1 482 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 METTL21EPA6NDL7 271 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 A6NL46 340 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 HPXP02790 462 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 SERPINA5P05154 406 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 LPLP06858 475 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 SULT1A3P0DMM9 295 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 SULT1A4P0DMN0 295 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 OTX1P32242 354 aaPredicted RBP10.12□□□□□ -0.79
USP46-204ENST00000503060 MC5RP33032 325 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 ZNF93P35789 620 aaPredicted RBP10.12□□□□□ -0.79
USP46-204ENST00000503060 RFC3P40938 356 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 SLC6A9P48067 706 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 ATP5IP56385 69 aaPredicted RBP10.12□□□□□ -0.79
USP46-204ENST00000503060 BAMBIQ13145 260 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 UNC119Q13432 240 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 CLEC1AQ8NC01 280 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 ZFAND1Q8TCF1 268 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 TMEM38BQ9NVV0 291 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 ZNF222Q9UK12 451 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 SSNA1O43805 119 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 CRHP06850 196 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 CST2P09228 141 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 VSIG8P0DPA2 414 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 CXCL3P19876 107 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 GAMTQ14353 236 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 ZNF782Q6ZMW2 699 aaPredicted RBP10.12□□□□□ -0.79
USP46-204ENST00000503060 RNF144BQ7Z419 303 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 PIP4P1Q86T03 277 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 ACBD4Q8NC06 268 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 NUDT10Q8NFP7 164 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 MAFIPQ8WZ33 124 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 CORO2AQ92828 525 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 FAM46BQ96A09 425 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 LYZL4Q96KX0 146 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 TMEM246Q9BRR3 403 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 OR51M1Q9H341 326 aa10.12□□□□□ -0.79
USP46-204ENST00000503060 PARPBPQ9NWS1 579 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms