RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CD300AQ9UGN4 299 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 FAM32AQ9Y421 112 aaKnown RBP12.46□□□□□ -0.41
HDAC6-236ENST00000498808 LCE6AA0A183 80 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 RFPL4AA6NLU0 287 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 C17orf98A8MV24 154 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 RFPL4AL1F8VTS6 287 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 ZNF593O00488 134 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-236ENST00000498808 ZFPL1O95159 310 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 HSD11B1P28845 292 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 SLC15A1P46059 708 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 GPM6AP51674 278 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 DGCR2P98153 550 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 TEX30Q5JUR7 227 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 LINC00471Q8N535 108 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 OR11H6Q8NGC7 330 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 TFAP2CQ92754 450 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 C7orf34Q96L11 122 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 MCRIP2Q9BUT9 160 aaKnown RBP12.45□□□□□ -0.42
HDAC6-236ENST00000498808 OR10A2Q9H208 303 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 OR51I2Q9H344 312 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 ABCB9Q9NP78 766 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 BRD7Q9NPI1 651 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 HILPDAQ9Y5L2 63 aa12.45□□□□□ -0.42
HDAC6-236ENST00000498808 GSTA4O15217 222 aa12.44□□□□□ -0.42
HDAC6-236ENST00000498808 GYPBP06028 91 aa12.44□□□□□ -0.42
HDAC6-236ENST00000498808 LPLP06858 475 aa12.44□□□□□ -0.42
HDAC6-236ENST00000498808 PIPP12273 146 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-236ENST00000498808 AZGP1P25311 298 aaKnown RBP12.44□□□□□ -0.42
HDAC6-236ENST00000498808 CEBPDP49716 269 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-236ENST00000498808 THBS3P49746 956 aa12.44□□□□□ -0.42
HDAC6-236ENST00000498808 SLC34A1Q06495 639 aa12.44□□□□□ -0.42
HDAC6-236ENST00000498808 DOC2BQ14184 412 aa12.44□□□□□ -0.42
HDAC6-236ENST00000498808 EIF2B1Q14232 305 aaKnown RBP12.44□□□□□ -0.42
HDAC6-236ENST00000498808 ZNF770Q6IQ21 691 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-236ENST00000498808 ACP7Q6ZNF0 438 aa12.44□□□□□ -0.42
HDAC6-236ENST00000498808 CALHM1Q8IU99 346 aa12.44□□□□□ -0.42
HDAC6-236ENST00000498808 TIGD4Q8IY51 512 aa12.44□□□□□ -0.42
HDAC6-236ENST00000498808 ZDHHC23Q8IYP9 409 aa12.44□□□□□ -0.42
HDAC6-236ENST00000498808 OR13D1Q8NGV5 346 aa12.44□□□□□ -0.42
HDAC6-236ENST00000498808 ZNF649Q9BS31 505 aa12.44□□□□□ -0.42
HDAC6-236ENST00000498808 RGCCQ9H4X1 137 aa12.44□□□□□ -0.42
HDAC6-236ENST00000498808 DSCAML1Q8TD84 2053 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 NME4O00746 187 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 EDF1O60869 148 aaKnown RBP12.43□□□□□ -0.42
HDAC6-236ENST00000498808 NCK1P16333 377 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 FMO3P31513 532 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 GSSP48637 474 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 OR12D2P58182 307 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 MAPRE2Q15555 327 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 ZNF561Q8N587 486 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 FAM86B1Q8N7N1 296 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 SLC37A3Q8NCC5 494 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 RNF133Q8WVZ7 376 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 AQP3Q92482 292 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 FAM162AQ96A26 154 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 PGAM5Q96HS1 289 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 SIKE1Q9BRV8 207 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 C1orf21Q9H246 121 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 EGLN3Q9H6Z9 239 aa12.43□□□□□ -0.42
HDAC6-236ENST00000498808 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-236ENST00000498808 MEX3AA1L020 520 aaKnown RBP12.42□□□□□ -0.42
HDAC6-236ENST00000498808 SH2D7A6NKC9 451 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-236ENST00000498808 ZNF732B4DXR9 585 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 SLC1A7O00341 560 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 APOC1P02654 83 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 CLUP10909 449 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 PRDX2P32119 198 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 GNG3P63215 75 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 DYNC1I2Q13409 638 aaKnown RBP12.42□□□□□ -0.42
HDAC6-236ENST00000498808 ABCA11PQ4W5N1 156 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 LCN8Q6JVE9 175 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 UNQ9370/PRO34162Q6UXP9 181 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 C18orf65Q6ZTR6 163 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 C16orf82Q7Z2V1 217 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 ARPINQ7Z6K5 226 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 OR51D1Q8NGF3 324 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 ZNF671Q8TAW3 534 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 RCN3Q96D15 328 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 ZNF488Q96MN9 340 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 AMELYQ99218 206 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 ABHD6Q9BV23 337 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 SAR1AQ9NR31 198 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 AP3M1Q9Y2T2 418 aa12.42□□□□□ -0.42
HDAC6-236ENST00000498808 TK1P04183 234 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 AMY1AP04745 511 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 AMY2AP04746 511 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 IGHV1-8P0DP01 117 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 SPI1P17947 270 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 CD24P25063 80 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 OPRL1P41146 370 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 CRMP1Q14194 572 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 SMIM21Q3B7S5 101 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 CEP78Q5JTW2 689 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 MINOS1Q5TGZ0 78 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 HAGHLQ6PII5 290 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-236ENST00000498808 POC1AQ8NBT0 407 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 HIST1H2AAQ96QV6 131 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 PRR25Q96S07 402 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 P2RX4Q99571 388 aa12.41□□□□□ -0.42
HDAC6-236ENST00000498808 NMNAT2Q9BZQ4 307 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms