RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 ASCL4Q6XD76 172 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 DCDC5Q6ZRR9 648 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 RFPL4BQ6ZWI9 263 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 SNX29P2Q8IUI4 249 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 CENPSQ8N2Z9 138 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 GALNT11Q8NCW6 608 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 OR8G5Q8NG78 346 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 OR10R2Q8NGX6 335 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 OR51F2Q8NH61 342 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 LILRB4Q8NHJ6 448 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 SLC25A40Q8TBP6 338 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 KLF14Q8TD94 323 aaPredicted RBP7.27□□□□□ -1.25
SF3A1-210ENST00000498259 UBASH3BQ8TF42 649 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 NPRL2Q8WTW4 380 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 OR5P3Q8WZ94 311 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 RNASE6Q93091 150 aaKnown RBP7.27□□□□□ -1.25
SF3A1-210ENST00000498259 RAB3CQ96E17 227 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 NEDD4LQ96PU5 975 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 GAL3ST1Q99999 423 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 SOX7Q9BT81 388 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 C1QTNF6Q9BXI9 259 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 PKIBQ9C010 78 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 SPACA1Q9HBV2 294 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 RBFOX1Q9NWB1 397 aaKnown RBP7.27□□□□□ -1.25
SF3A1-210ENST00000498259 GLS2Q9UI32 602 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 FBXO9Q9UK97 447 aaPredicted RBP7.27□□□□□ -1.25
SF3A1-210ENST00000498259 NCOA6Q14686 2063 aaPredicted RBP7.27□□□□□ -1.25
SF3A1-210ENST00000498259 SPTBN4Q9H254 2564 aa7.27□□□□□ -1.25
SF3A1-210ENST00000498259 ARHGAP21Q5T5U3 1957 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 LRP5LA4QPB2 252 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 C5orf63A6NC05 138 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 ZNF732B4DXR9 585 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 LYRM1O43325 122 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 CA11O75493 328 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 HTR3BO95264 441 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 MELTFP08582 738 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 CELA3BP08861 270 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 TBPP20226 339 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 SERPINA2P20848 420 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 AGAP20933 346 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 TNFSF4P23510 183 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 CD40P25942 277 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 HAAOP46952 286 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 PTH2RP49190 550 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 KLF3P57682 345 aaPredicted RBP7.26□□□□□ -1.25
SF3A1-210ENST00000498259 TAS2R19P59542 299 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 GNG2P59768 71 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 RPS27AP62979 156 aaKnown RBP7.26□□□□□ -1.25
SF3A1-210ENST00000498259 QRFPP83859 136 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 IL24Q13007 206 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 TNK1Q13470 666 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 OR2T2Q6IF00 324 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 Q6ZTK2 550 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 OSR2Q8N2R0 312 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 PAQR4Q8N4S7 273 aaPredicted RBP7.26□□□□□ -1.25
SF3A1-210ENST00000498259 ZNF808Q8N4W9 903 aaPredicted RBP7.26□□□□□ -1.25
SF3A1-210ENST00000498259 ZNF611Q8N823 705 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 NUP37Q8NFH4 326 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 MARS2Q96GW9 593 aaKnown RBP7.26□□□□□ -1.25
SF3A1-210ENST00000498259 ZC3HAV1LQ96H79 300 aaKnown RBP7.26□□□□□ -1.25
SF3A1-210ENST00000498259 SPACA5Q96QH8 159 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 DIRC2Q96SL1 478 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 SDHCQ99643 169 aaPredicted RBP7.26□□□□□ -1.25
SF3A1-210ENST00000498259 ADAT1Q9BUB4 502 aaKnown RBP7.26□□□□□ -1.25
SF3A1-210ENST00000498259 TM2D1Q9BX74 207 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 SELENOIQ9C0D9 397 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 OR51B6Q9H340 312 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 AUNIPQ9H7T9 357 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 IFT46Q9NQC8 304 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 PLEKHJ1Q9NW61 149 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 PURGQ9UJV8 347 aaKnown RBP7.26□□□□□ -1.25
SF3A1-210ENST00000498259 CACNG2Q9Y698 323 aa7.26□□□□□ -1.25
SF3A1-210ENST00000498259 ANKRD11Q6UB99 2663 aaPredicted RBP7.26□□□□□ -1.25
SF3A1-210ENST00000498259 ASPMQ8IZT6 3477 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 H7C417 338 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 ORC5O43913 435 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 ACAA1P09110 424 aaPredicted RBP7.25□□□□□ -1.25
SF3A1-210ENST00000498259 ZNF250P15622 560 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 CA6P23280 308 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 GDNFP39905 211 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 PMELP40967 661 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 VEGFCP49767 419 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 FABP6P51161 128 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 GPM6AP51674 278 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 ZP1P60852 638 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 IFITM3Q01628 133 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 PSG7Q13046 419 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 ARFRP1Q13795 201 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 MEF2DQ14814 521 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 MPV17LQ2QL34 196 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 CDNFQ49AH0 187 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 ACTBL2Q562R1 376 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 SPATA46Q5T0L3 261 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 ELP2Q6IA86 826 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 ALKBH2Q6NS38 261 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 Q6ZNX1 250 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 SLC25A26Q70HW3 274 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 FAM89BQ8N5H3 189 aa7.25□□□□□ -1.25
SF3A1-210ENST00000498259 RELL2Q8NC24 303 aaPredicted RBP7.25□□□□□ -1.25
SF3A1-210ENST00000498259 BHLHE23Q8NDY6 225 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms