RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 GOLGA8HP0CJ92 632 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 THRAP10827 490 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 IL5RAQ01344 420 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 INCA1Q0VD86 236 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 CUL2Q13617 745 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 GABRA6Q16445 453 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 RPEL1Q2QD12 228 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 LIN9Q5TKA1 542 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 OR2T5Q6IEZ7 315 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 UNC93AQ86WB7 457 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 PDPNQ86YL7 162 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 RAB43Q86YS6 212 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 APRG1Q8IVJ8 170 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 C8orf31Q8N9H6 132 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 OR2T29Q8NH02 315 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 RCN3Q96D15 328 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 OTUB2Q96DC9 234 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 C11orf70Q9BRQ4 267 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 AGMATQ9BSE5 352 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 MRPS30Q9NP92 439 aaKnown RBP1.11□□□□□ -2.23
SMC4-227ENST00000497984 FBXO8Q9NRD0 319 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 MYEF2Q9P2K5 600 aaKnown RBP1.11□□□□□ -2.23
SMC4-227ENST00000497984 TBC1D24Q9ULP9 559 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
SMC4-227ENST00000497984 AHNAK2Q8IVF2 5795 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 COL11A1P12107 1806 aaPredicted RBP1.1□□□□□ -2.23
SMC4-227ENST00000497984 NSD2O96028 1365 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 SIGLEC1Q9BZZ2 1709 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 NPHP4O75161 1426 aaPredicted RBP1.1□□□□□ -2.23
SMC4-227ENST00000497984 MYBPHLA2RUH7 354 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 IGLL5B9A064 214 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 OVOL1O14753 267 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 ZBTB5O15062 677 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 SLC31A1O15431 190 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 KRT16P08779 473 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 OR8G3PP0DMU2 310 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 RPS5P46782 204 aaKnown RBP1.1□□□□□ -2.23
SMC4-227ENST00000497984 FMODQ06828 376 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 FAM122BQ7Z309 247 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 CPNE9Q8IYJ1 553 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 C3orf22Q8N5N4 141 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 OR2M7Q8NG81 312 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 ITLN2Q8WWU7 325 aaPredicted RBP1.1□□□□□ -2.23
SMC4-227ENST00000497984 RXFP2Q8WXD0 754 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 UBE2E2Q96LR5 201 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 JSRP1Q96MG2 331 aaPredicted RBP1.1□□□□□ -2.23
SMC4-227ENST00000497984 Q96MT0 163 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 AUNIPQ9H7T9 357 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 SND1-IT1Q9HBX3 110 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 TMEM106BQ9NUM4 274 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 TRAPPC1Q9Y5R8 145 aa1.1□□□□□ -2.23
SMC4-227ENST00000497984 BAZ1BQ9UIG0 1483 aaKnown RBP1.1□□□□□ -2.23
SMC4-227ENST00000497984 BRD4O60885 1362 aaPredicted RBP1.09□□□□□ -2.23
SMC4-227ENST00000497984 IGKV1OR2-108A0A075B7D4 117 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 SERTM2A0A1B0GWG4 89 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 GMNCA6NCL1 334 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 TRIM64CA6NLI5 447 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 SIVA1O15304 175 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 XRCC2O43543 280 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 ENTPD6O75354 484 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 LCA5LO95447 670 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 PRB1P04280 392 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 IFI30P13284 250 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 NUDT2P50583 147 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 GRB2P62993 217 aaKnown RBP1.09□□□□□ -2.23
SMC4-227ENST00000497984 RAD51Q06609 339 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 LINC00303Q3SY05 128 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 SLC30A8Q8IWU4 369 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 EIF4E3Q8N5X7 224 aaKnown RBP1.09□□□□□ -2.23
SMC4-227ENST00000497984 ITFG1Q8TB96 612 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 ORAOV1Q8WV07 137 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 APH1AQ96BI3 265 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 C20orf166-AS1Q96NR2 134 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 OPALINQ96PE5 141 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 SCGB3A2Q96PL1 93 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 ZNF649Q9BS31 505 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 HIGD2AQ9BW72 106 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 CD209Q9NNX6 404 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 MCUBQ9NWR8 336 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 AHSPQ9NZD4 102 aa1.09□□□□□ -2.23
SMC4-227ENST00000497984 TRAV25A0A0B4J276 109 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 A0A0B4J2E0 115 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 A0A1W2PNM2 257 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 A0A1W2PRD5 423 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 GGTLC3B5MD39 225 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 IGHMP01871 453 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 CATP04040 527 aaKnown RBP1.08□□□□□ -2.24
SMC4-227ENST00000497984 IGKV1-16P04430 117 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 CTSGP08311 255 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 SNRPAP09012 282 aaKnown RBP1.08□□□□□ -2.24
SMC4-227ENST00000497984 ZNF708P17019 499 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 TEAD1P28347 426 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 TAS2R39P59534 338 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 ADIGQ0VDE8 80 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 ZNF181Q2M3W8 571 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 KLHL40Q2TBA0 621 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 PCOTHQ58A44 107 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 BEX5Q5H9J7 111 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 Q6ZQT7 251 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms