RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 OR51T1Q8NGJ9 327 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 OR9A4Q8NGU2 314 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 CCL4L1Q8NHW4 92 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 LYPD6BQ8NI32 183 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 RSC1A1Q92681 617 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 RAB24Q969Q5 203 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 ZNF2Q9BSG1 426 aaPredicted RBP11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 R4GMQ9 66 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 CABIN1Q9Y6J0 2220 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 FTCDNL1E5RQL4 147 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 OR4A8P0C604 315 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 HIST1H1DP16402 221 aaKnown RBP11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 TBPP20226 339 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 P2RY1P47900 373 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 GNG10P50151 68 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 JOSD1Q15040 202 aaPredicted RBP11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 PCK2Q16822 640 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 ZNF524Q96C55 264 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 CABLES2Q9BTV7 478 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 BRWD1Q9NSI6 2320 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 PRSS37A4D1T9 235 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 FAM221BA6H8Z2 402 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 A8MVM7 634 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 M0R143 59 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 HSD17B6O14756 317 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 HCRTR2O43614 444 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 RPP30P78346 268 aaKnown RBP11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 INSM1Q01101 510 aaPredicted RBP11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 HNRNPA1L2Q32P51 320 aaKnown RBP11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 FIGLAQ6QHK4 219 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 FBXW12Q6X9E4 464 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 BCORP1Q8N888 145 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 NOL4LQ96MY1 436 aaPredicted RBP11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 VN1R1Q9GZP7 353 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 LPAR5Q9H1C0 372 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 DUSP15Q9H1R2 295 aaPredicted RBP11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 POLR1DQ9Y2S0 133 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 STRAPQ9Y3F4 350 aaKnown RBP11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 CCDC187A0A096LP49 1063 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 ZFP92A6NM28 416 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 E5RGE8 158 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 H0Y8X5 98 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 MKRN2OSH3BPM6 223 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 DFFBO76075 338 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 IDH3GP51553 393 aaPredicted RBP11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 AGBL4Q5VU57 503 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 MEX3BQ6ZN04 569 aaKnown RBP11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 FAM185AQ8N0U4 392 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 LFNGQ8NES3 379 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 TSACCQ96A04 125 aaPredicted RBP11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 OR2A5Q96R48 311 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 LMF2Q9BU23 707 aaKnown RBP11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 PPP1R14DQ9NXH3 145 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 NSG2Q9Y328 171 aa11.55□□□□□ -0.56
GAPVD1-220ENST00000497580 LRRK1Q38SD2 2015 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 FSTP19883 344 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 SLC37A1P57057 533 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 PMS2P11Q13670 270 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 TMEM176BQ3YBM2 270 aaPredicted RBP11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 HIKESHIQ53FT3 197 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 C1orf140Q5VVS0 124 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 DMRTA1Q5VZB9 504 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 GPR137CQ8N3F9 429 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 LRRC18Q8N456 261 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 OR6X1Q8NH79 312 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 OR5R1Q8NH85 324 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 FBRSQ9HAH7 460 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 PLEKHA2Q9HB19 425 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 GNG13Q9P2W3 67 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 HEBP2Q9Y5Z4 205 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 XKRY2A2RUG3 117 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 FAM24AA6NFZ4 105 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 ASAH2BP0C7U1 165 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 PNMTP11086 282 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 ABCA11PQ4W5N1 156 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 KLHL24Q6TFL4 600 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 LYZL2Q7Z4W2 148 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 ATG4DQ86TL0 474 aaPredicted RBP11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 PATE1Q8WXA2 126 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 IGFLR1Q9H665 355 aa11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.54□□□□□ -0.56
GAPVD1-220ENST00000497580 CDC14CA4D256 554 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 GPR89AB7ZAQ6 455 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 BPNT1O95861 308 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 ONECUT2O95948 504 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 SRP19P09132 144 aaKnown RBP11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 GPR89BP0CG08 455 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 BLVRBP30043 206 aaPredicted RBP11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 GLIPR1P48060 266 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 RUNX1Q01196 453 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 GLO1Q04760 184 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 OGFOD3Q6PK18 319 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 OR5L1Q8NGL2 311 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 OR51E1Q8TCB6 317 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 TMEM37Q8WXS4 190 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 EMG1Q92979 244 aaKnown RBP11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 TMEM208Q9BTX3 173 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 TBC1D29Q9UFV1 150 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 PITPNC1Q9UKF7 332 aa11.53□□□□□ -0.56
GAPVD1-220ENST00000497580 EDDM13A0A1B0GTR0 161 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms