RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 SLC22A8Q8TCC7 542 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 IGHV5-10-1A0A0J9YXX1 117 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 C9JQL5 133 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 GLI4P10075 376 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 CBX5P45973 191 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 AKR1D1P51857 326 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 CHAF1BQ13112 559 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 CDCP2Q5VXM1 449 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 BRICD5Q6PL45 260 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 FADS6Q8N9I5 356 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 DNASE2BQ8WZ79 361 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 NABP1Q96AH0 204 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 SCGB3A2Q96PL1 93 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 S100A13Q99584 98 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 NRIP2Q9BQI9 281 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 NELFAQ9H3P2 528 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 GPR173Q9NS66 373 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 NDRG3Q9UGV2 375 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 HDGFL3Q9Y3E1 203 aa11.39□□□□□ -0.59
PTPN7-217ENST00000495688 SPRY1O43609 319 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-217ENST00000495688 CD63P08962 238 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 OPRM1P35372 400 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 GUCA1AP43080 201 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-217ENST00000495688 H3F3AP84243 136 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 C20orf196Q8IYI0 205 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 GJC3Q8NFK1 279 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 DYRK2Q92630 601 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 EMG1Q92979 244 aaKnown RBP11.38□□□□□ -0.59
PTPN7-217ENST00000495688 PIGQQ9BRB3 760 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 FAAP24Q9BTP7 215 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 PHF7Q9BWX1 381 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-217ENST00000495688 CHST5Q9GZS9 411 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 PCED1AQ9H1Q7 454 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 PLEKHJ1Q9NW61 149 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 OCIAD1Q9NX40 245 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 PLEK2Q9NYT0 353 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 FIGNL2A6NMB9 653 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 TLX3O43711 291 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-217ENST00000495688 IFNA2P01563 188 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 ACKR3P25106 362 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 SLC35A1P78382 337 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 TAF9Q16594 264 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 SP6Q3SY56 376 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 DHRS7BQ6IAN0 325 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-217ENST00000495688 ETV3LQ6ZN32 361 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 SPAG16Q8N0X2 631 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 RHBDD1Q8TEB9 315 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 C2CD4CQ8TF44 421 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 HAS2Q92819 552 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 MRPL24Q96A35 216 aaKnown RBP11.38□□□□□ -0.59
PTPN7-217ENST00000495688 FBXO17Q96EF6 278 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 SMIM8Q96KF7 97 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 JSRP1Q96MG2 331 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-217ENST00000495688 SEC11CQ9BY50 192 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTPN7-217ENST00000495688 RCC2Q9P258 522 aaKnown RBP11.38□□□□□ -0.59
PTPN7-217ENST00000495688 C14orf166Q9Y224 244 aaKnown RBP11.38□□□□□ -0.59
PTPN7-217ENST00000495688 ZNF175Q9Y473 711 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 V9GYS6 101 aa11.38□□□□□ -0.59
PTPN7-217ENST00000495688 SERPINE3A8MV23 424 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 M0R135 149 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 SCGB1D2O95969 90 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 TMEM225BP0DP42 221 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 CPT2P23786 658 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 CTSSP25774 331 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 THBS4P35443 961 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 ALDH3B1P43353 468 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 LSM6P62312 80 aaKnown RBP11.37□□□□□ -0.59
PTPN7-217ENST00000495688 RAET1LQ5VY80 246 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 SLC25A43Q8WUT9 341 aaPredicted RBP11.37□□□□□ -0.59
PTPN7-217ENST00000495688 ZNF799Q96GE5 643 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 CCDC74BQ96LY2 380 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 PRRC2CQ9Y520 2896 aaKnown RBP11.37□□□□□ -0.59
PTPN7-217ENST00000495688 LY6G6EA0A0G2JKS1 128 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 FAM221AA4D161 298 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 TNRC18O15417 2968 aaPredicted RBP11.37□□□□□ -0.59
PTPN7-217ENST00000495688 CCL3P10147 92 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 RPL12P30050 165 aaKnown RBP11.37□□□□□ -0.59
PTPN7-217ENST00000495688 CD80P33681 288 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 RBMXP38159 391 aaKnown RBP11.37□□□□□ -0.59
PTPN7-217ENST00000495688 CAV2P51636 162 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 AKIRIN2Q53H80 203 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 TSPO2Q5TGU0 170 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 RPUSD3Q6P087 351 aaKnown RBP11.37□□□□□ -0.59
PTPN7-217ENST00000495688 SLC16A14Q7RTX9 510 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 SULF2Q8IWU5 870 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 ZFP82Q8N141 532 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 SLC39A7Q92504 469 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 TOMM40LQ969M1 308 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 TM2D1Q9BX74 207 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 CNTNAP3Q9BZ76 1288 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 FBXL17Q9UF56 701 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 LSM5Q9Y4Y9 91 aaKnown RBP11.37□□□□□ -0.59
PTPN7-217ENST00000495688 U3KQA8 63 aa11.37□□□□□ -0.59
PTPN7-217ENST00000495688 A0A0U1RQV5 110 aa11.36□□□□□ -0.59
PTPN7-217ENST00000495688 SNAPINO95295 136 aa11.36□□□□□ -0.59
PTPN7-217ENST00000495688 SFTA3P0C7M3 94 aa11.36□□□□□ -0.59
PTPN7-217ENST00000495688 PATE4P0C8F1 98 aa11.36□□□□□ -0.59
PTPN7-217ENST00000495688 PET100P0DJ07 73 aa11.36□□□□□ -0.59
PTPN7-217ENST00000495688 EIF1P41567 113 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms