RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 H0YAE9 185 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 RPL36A-HNRNPH2H7BZ11 118 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 M0R129 80 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 BHLHE40O14503 412 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 IMPA2O14732 288 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 BUB3O43684 328 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 IDH3BO43837 385 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 VAMP5O95183 116 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 GNAO1P09471 354 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 HIST1H1CP16403 213 aaKnown RBP5.39□□□□□ -1.55
VIM-207ENST00000495528 TMEM11P17152 192 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 PCMT1P22061 227 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 GGT2P36268 569 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 HSPA13P48723 471 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 BIDP55957 195 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 MRPS34P82930 218 aaKnown RBP5.39□□□□□ -1.55
VIM-207ENST00000495528 IL5RAQ01344 420 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 POU3F1Q03052 451 aaPredicted RBP5.39□□□□□ -1.55
VIM-207ENST00000495528 CAMK2DQ13557 499 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 MELKQ14680 651 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 ELFN2Q5R3F8 820 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 SLX4IPQ5VYV7 408 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 CARD17Q5XLA6 110 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 KRT80Q6KB66 452 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 FAHD2BQ6P2I3 314 aaPredicted RBP5.39□□□□□ -1.55
VIM-207ENST00000495528 CCDC190Q86UF4 302 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 WDFY1Q8IWB7 410 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 SYT14Q8NB59 555 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 CYB561A3Q8NBI2 242 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 OR2T33Q8NG76 320 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 OR52E2Q8NGJ4 325 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 ZNF418Q8TF45 676 aaPredicted RBP5.39□□□□□ -1.55
VIM-207ENST00000495528 PTP4A1Q93096 173 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 TMEM186Q96B77 213 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 RASD2Q96D21 266 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 ZMYND19Q96E35 227 aaPredicted RBP5.39□□□□□ -1.55
VIM-207ENST00000495528 FAHD2AQ96GK7 314 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 TSPAN32Q96QS1 320 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 ZNF184Q99676 751 aaPredicted RBP5.39□□□□□ -1.55
VIM-207ENST00000495528 GABARAPL3Q9BY60 117 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 MRPL37Q9BZE1 423 aaKnown RBP5.39□□□□□ -1.55
VIM-207ENST00000495528 LINC00470Q9BZP3 86 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 NDEL1Q9GZM8 345 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 RACGAP1Q9H0H5 632 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 TXNIPQ9H3M7 391 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 RERGLQ9H628 205 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 NARFLQ9H6Q4 476 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 MED20Q9H944 212 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 NOX3Q9HBY0 568 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 SLC25A19Q9HC21 320 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 CRLF2Q9HC73 371 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 DYNLRB1Q9NP97 96 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 IMPAD1Q9NX62 359 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 TREM2Q9NZC2 230 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 B3GAT1Q9P2W7 334 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 RAB26Q9ULW5 256 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 BAIAP2Q9UQB8 552 aa5.39□□□□□ -1.55
VIM-207ENST00000495528 A0A1B0GUV1 79 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 FAM183AA6NL82 134 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 IFITM10A6NMD0 228 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 RIIAD1A6NNX1 92 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 A8MZ25 164 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 PRR23D1E9PI22 279 aaPredicted RBP5.38□□□□□ -1.55
VIM-207ENST00000495528 E9PQ18 207 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 H7C1C5 153 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 TRIM77I1YAP6 450 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 XKRYO14609 159 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 ARPC3O15145 178 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 SURF4O15260 269 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 DENRO43583 198 aaKnown RBP5.38□□□□□ -1.55
VIM-207ENST00000495528 TRAF3IP2O43734 574 aaPredicted RBP5.38□□□□□ -1.55
VIM-207ENST00000495528 PRKYO43930 277 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 TRMUO75648 421 aaKnown RBP5.38□□□□□ -1.55
VIM-207ENST00000495528 ZNF432O94892 652 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 OR2C1O95371 312 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 RENP00797 406 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 IFNGP01579 166 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 MSMBP08118 114 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 PRR23D2P0DMB1 279 aaPredicted RBP5.38□□□□□ -1.55
VIM-207ENST00000495528 ACADSP16219 412 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 ARR3P36575 388 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 ALDH3B1P43353 468 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 GPR6P46095 362 aaPredicted RBP5.38□□□□□ -1.55
VIM-207ENST00000495528 CAMPP49913 170 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 DAP3P51398 398 aaKnown RBP5.38□□□□□ -1.55
VIM-207ENST00000495528 FUT6P51993 359 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 SH3BGRP55822 239 aaPredicted RBP5.38□□□□□ -1.55
VIM-207ENST00000495528 HILS1P60008 231 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 CDC42P60953 191 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 LMO4P61968 165 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 LCN6P62502 163 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 SNTB2Q13425 540 aaKnown RBP5.38□□□□□ -1.55
VIM-207ENST00000495528 CEACAM16Q2WEN9 425 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 PHYHD1Q5SRE7 291 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 ARMC4Q5T2S8 1044 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 ZNF691Q5VV52 312 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 C12orf73Q69YU5 71 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 GPR139Q6DWJ6 353 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 LEG1Q6P5S2 330 aa5.38□□□□□ -1.55
VIM-207ENST00000495528 C18orf65Q6ZTR6 163 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms