RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 FBLN5Q9UBX5 448 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 ZNF222Q9UK12 451 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 SF3B6Q9Y3B4 125 aaKnown RBP10.29□□□□□ -0.76
SKA1-205ENST00000494518 LRP12Q9Y561 859 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 PRR23D1E9PI22 279 aaPredicted RBP10.28□□□□□ -0.76
SKA1-205ENST00000494518 CHST1O43916 411 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 PRR23D2P0DMB1 279 aaPredicted RBP10.28□□□□□ -0.76
SKA1-205ENST00000494518 PAICSP22234 425 aaKnown RBP10.28□□□□□ -0.76
SKA1-205ENST00000494518 BMXP51813 675 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 EFNB2P52799 333 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 MS4A2Q01362 244 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 GINS1Q14691 196 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 FAM189A2Q15884 450 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 NSUN5P1Q3KNT7 163 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 FAM98BQ52LJ0 330 aaKnown RBP10.28□□□□□ -0.76
SKA1-205ENST00000494518 HAGHLQ6PII5 290 aaPredicted RBP10.28□□□□□ -0.76
SKA1-205ENST00000494518 MOB3CQ70IA8 216 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 KRT77Q7Z794 578 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 TMEM179BQ7Z7N9 219 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 DHFR2Q86XF0 187 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 CPOQ8IVL8 374 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 OR4M1Q8NGD0 313 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 GIPC3Q8TF64 312 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 CLPTM1LQ96KA5 538 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 DMRTB1Q96MA1 342 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 OR51I2Q9H344 312 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 NIPAL2Q9H841 368 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 ABCB9Q9NP78 766 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 NDE1Q9NXR1 346 aa10.28□□□□□ -0.76
SKA1-205ENST00000494518 MEX3AA1L020 520 aaKnown RBP10.27□□□□□ -0.77
SKA1-205ENST00000494518 B2RBV5 119 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 MRPL3P09001 348 aaKnown RBP10.27□□□□□ -0.77
SKA1-205ENST00000494518 CCL3L1P16619 93 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 FAHP16930 419 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 GNG3P63215 75 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 HABP2Q14520 560 aaPredicted RBP10.27□□□□□ -0.77
SKA1-205ENST00000494518 FAM76BQ5HYJ3 339 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 PLCXD3Q63HM9 321 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 LCN8Q6JVE9 175 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 ZNF782Q6ZMW2 699 aaPredicted RBP10.27□□□□□ -0.77
SKA1-205ENST00000494518 HS3ST5Q8IZT8 346 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 CD177Q8N6Q3 437 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 PAPD5Q8NDF8 572 aaKnown RBP10.27□□□□□ -0.77
SKA1-205ENST00000494518 OR5D13Q8NGL4 314 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 OR2T6Q8NHC8 308 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 PPP1R14AQ96A00 147 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 CCDC124Q96CT7 223 aaKnown RBP10.27□□□□□ -0.77
SKA1-205ENST00000494518 LAMP5Q9UJQ1 280 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 ARL2BPQ9Y2Y0 163 aa10.27□□□□□ -0.77
SKA1-205ENST00000494518 TRBV23-1A0A0A0MS06 115 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 MEGF11A6BM72 1044 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 RFPL4AA6NLU0 287 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 PRR32B1ATL7 298 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 RFPL4AL1F8VTS6 287 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 SYNGR1O43759 233 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 OPN1MWP04001 364 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 OPN1MW2P0DN77 364 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 OPN1MW3P0DN78 364 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 PIPP12273 146 aaPredicted RBP10.26□□□□□ -0.77
SKA1-205ENST00000494518 KIR2DS4P43632 304 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 MAP2K3P46734 347 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 GNGT1P63211 74 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 CEACAM21Q3KPI0 293 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 SPATS1Q496A3 300 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 KIAA2026Q5HYC2 2103 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 SAMD5Q5TGI4 173 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 TMEM236Q5W0B7 351 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 CD300LDQ6UXZ3 194 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 THAP5Q7Z6K1 395 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 LHFPL4Q7Z7J7 247 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 OR51E1Q8TCB6 317 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 AQP3Q92482 292 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 FAM234AQ9H0X4 552 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 GPR84Q9NQS5 396 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 FAM206AQ9NX38 181 aa10.26□□□□□ -0.77
SKA1-205ENST00000494518 TMEM269A0A1B0GVZ9 245 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 A6NIN4 97 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 DCTN3O75935 186 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 CST1P01037 141 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 ALOX5APP20292 161 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 RAB13P51153 203 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 RPL31P62899 125 aaKnown RBP10.25□□□□□ -0.77
SKA1-205ENST00000494518 MFGE8Q08431 387 aaPredicted RBP10.25□□□□□ -0.77
SKA1-205ENST00000494518 APOFQ13790 326 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 TRIM25Q14258 630 aaKnown RBP10.25□□□□□ -0.77
SKA1-205ENST00000494518 ZNF273Q14593 569 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 ZBTB37Q5TC79 503 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 TMEM200BQ69YZ2 307 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 CRIP3Q6Q6R5 217 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 ACP7Q6ZNF0 438 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 Q6ZPA2 131 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 TRPM8Q7Z2W7 1104 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 TMEM219Q86XT9 240 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 DYNAPQ8N1N2 210 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 OR2T27Q8NH04 317 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 ZNF671Q8TAW3 534 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 CFHR4Q92496 578 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 SDSLQ96GA7 329 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 OR5M11Q96RB7 305 aa10.25□□□□□ -0.77
SKA1-205ENST00000494518 TEAD3Q99594 435 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms