RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 MFNGO00587 321 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 RBBP9O75884 186 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 PTBP3O95758 552 aaKnown RBP5.82□□□□□ -1.48
MSH5-217ENST00000494458 LPLP06858 475 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 HCKP08631 526 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 FAM90A15PP0C7V4 464 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 FAM90A13PP0C7W8 464 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 FAM90A14PP0C7W9 464 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 FAM90A24PP0C7X0 464 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 CECR9P0C854 216 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 HIST1H1DP16402 221 aaKnown RBP5.82□□□□□ -1.48
MSH5-217ENST00000494458 HLA-DMAP28067 261 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 PRSS3P35030 304 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 RAD52P43351 418 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 SRP9P49458 86 aaKnown RBP5.82□□□□□ -1.48
MSH5-217ENST00000494458 ATP1B3P54709 279 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 MTCP1P56278 107 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 AP3S2P59780 193 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 NKX6-1P78426 367 aaPredicted RBP5.82□□□□□ -1.48
MSH5-217ENST00000494458 SNTB2Q13425 540 aaKnown RBP5.82□□□□□ -1.48
MSH5-217ENST00000494458 HLXQ14774 488 aaPredicted RBP5.82□□□□□ -1.48
MSH5-217ENST00000494458 PPA1Q15181 289 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 TAB1Q15750 504 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 GFOD2Q3B7J2 385 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 FBXL19-AS1Q494R0 122 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 CDNFQ49AH0 187 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 PRR30Q53SZ7 412 aaPredicted RBP5.82□□□□□ -1.48
MSH5-217ENST00000494458 TMEM255AQ5JRV8 349 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 PLAC9Q5JTB6 97 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 AWAT2Q6E213 333 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 SIGIRRQ6IA17 410 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 GFRALQ6UXV0 394 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 C22orf34Q6ZV56 151 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 COMMD2Q86X83 199 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 LIX1LQ8IVB5 337 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 IZUMO1Q8IYV9 350 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 FTMTQ8N4E7 242 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 TOMM5Q8N4H5 51 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 CELF2-AS1Q8N7Q2 184 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 DTX3Q8N9I9 347 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 PNLDC1Q8NA58 520 aaKnown RBP5.82□□□□□ -1.48
MSH5-217ENST00000494458 TMEM229BQ8NBD8 167 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 STEAP2Q8NFT2 490 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 OR51T1Q8NGJ9 327 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 FAM46BQ96A09 425 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 CREB3L1Q96BA8 519 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 SPACA5Q96QH8 159 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 NKX3-1Q99801 234 aaPredicted RBP5.82□□□□□ -1.48
MSH5-217ENST00000494458 GAL3ST1Q99999 423 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 OCSTAMPQ9BR26 566 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 BCL2L14Q9BZR8 327 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 CST11Q9H112 138 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 ATG5Q9H1Y0 275 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 RHOFQ9HBH0 211 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 HRASLSQ9HDD0 168 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 LUZP4Q9P127 313 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 SLC7A11Q9UPY5 501 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 MRPS7Q9Y2R9 242 aaKnown RBP5.82□□□□□ -1.48
MSH5-217ENST00000494458 ZZEF1O43149 2961 aa5.82□□□□□ -1.48
MSH5-217ENST00000494458 A0A1W2PP11 408 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 C7orf66A4D0T2 115 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 OR5B21A6NL26 309 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 ZNF850A8MQ14 1090 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 CEACAM18A8MTB9 384 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 J3QL48 77 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 SOCS1O15524 211 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 TPD52L2O43399 206 aaKnown RBP5.81□□□□□ -1.48
MSH5-217ENST00000494458 SSX5O60225 188 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 LILRA1O75019 489 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 NOS1APO75052 506 aaPredicted RBP5.81□□□□□ -1.48
MSH5-217ENST00000494458 ZNF735P0CB33 412 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 TRAPPC2P0DI81 140 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 TRAPPC2BP0DI82 140 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 PTHLHP12272 177 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 ZNF250P15622 560 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 MGMTP16455 207 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 SELEP16581 610 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 CALCRP30988 508 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 CCKARP32238 428 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 CA7P43166 264 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 IDH3GP51553 393 aaPredicted RBP5.81□□□□□ -1.48
MSH5-217ENST00000494458 ERVK11-1P61568 191 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 PPP1CBP62140 327 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 RBPJQ06330 500 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 IL24Q13007 206 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 PSG7Q13046 419 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 PRDX4Q13162 271 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 ARL6IP1Q15041 203 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 TSC22D1Q15714 1073 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 AGAP6Q5VW22 663 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 TMEM211Q6ICI0 200 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 UNQ6126/PRO20091Q6UXV3 157 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 MOB3CQ70IA8 216 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 BTN2A1Q7KYR7 527 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 MRPL21Q7Z2W9 205 aaKnown RBP5.81□□□□□ -1.48
MSH5-217ENST00000494458 CALHM1Q8IU99 346 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 ZDHHC23Q8IYP9 409 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 RELL2Q8NC24 303 aaPredicted RBP5.81□□□□□ -1.48
MSH5-217ENST00000494458 OR56B1Q8NGI3 324 aa5.81□□□□□ -1.48
MSH5-217ENST00000494458 TNFAIP8L1Q8WVP5 186 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms