RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 LYPD2Q6UXB3 125 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 BTNL3Q6UXE8 466 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 C9orf139Q6ZV77 190 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 ZER1Q7Z7L7 766 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 SLC30A8Q8IWU4 369 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 C1orf174Q8IYL3 243 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 MICU2Q8IYU8 434 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 C19orf18Q8NEA5 215 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 OR10AD1Q8NGE0 317 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 OR51A7Q8NH64 312 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 OR10A6Q8NH74 314 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 TMEM239Q8WW34 195 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 PTP4A1Q93096 173 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 UPRTQ96BW1 309 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 HAVCR1Q96D42 359 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 THOC1Q96FV9 657 aaKnown RBP4.25□□□□□ -1.73
PTCD3-219ENST00000494323 MS4A10Q96PG2 267 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 RAB3IPQ96QF0 476 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-219ENST00000494323 CITED1Q99966 193 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 RBM4BQ9BQ04 359 aaKnown RBP4.25□□□□□ -1.73
PTCD3-219ENST00000494323 TMEM246Q9BRR3 403 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 ZNF426Q9BUY5 554 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 TXNIPQ9H3M7 391 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 EVA1AQ9H8M9 152 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 CHMP1AQ9HD42 196 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-219ENST00000494323 MAN2C1Q9NTJ4 1040 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 NKIRAS1Q9NYS0 192 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 MIOXQ9UGB7 285 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 IL19Q9UHD0 177 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 IL20RAQ9UHF4 553 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 RIMS3Q9UJD0 308 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 GMEB1Q9Y692 573 aa4.25□□□□□ -1.73
PTCD3-219ENST00000494323 CMYA5Q8N3K9 4069 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 IGLV5-52A0A0A0MRZ9 124 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 A0A1B0GUS0 222 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 hDV102S1A0JD36 115 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 C12orf71A8MTZ7 269 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-219ENST00000494323 A8MXK9 166 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 CENPBD1B2RD01 187 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 F5H5P2 479 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 FBP2O00757 339 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 SURF4O15260 269 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 SGCEO43556 437 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 ERLIN1O75477 346 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 PRB2P02812 416 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-219ENST00000494323 SFTPBP07988 381 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 TSPAN19P0C672 248 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 PPIAL4GP0DN37 164 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 GSTM3P21266 225 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 KITLGP21583 273 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 MSR1P21757 451 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 YAP1P46937 504 aaKnown RBP4.24□□□□□ -1.73
PTCD3-219ENST00000494323 MRPL19P49406 292 aaKnown RBP4.24□□□□□ -1.73
PTCD3-219ENST00000494323 GZMMP51124 257 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 TAF9Q16594 264 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 TTMPQ5BVD1 217 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 FAM122CQ6P4D5 195 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 ZNF620Q6ZNG0 422 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 HDDC2Q7Z4H3 204 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 PDZD9Q8IXQ8 264 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 MUC20Q8N307 709 aaPredicted RBP4.24□□□□□ -1.73
PTCD3-219ENST00000494323 BHLHE23Q8NDY6 225 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 OR8G5Q8NG78 346 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 OR4F5Q8NH21 305 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 LINC01006Q8NI28 216 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 THAP6Q8TBB0 222 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 CGREF1Q99674 301 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 SLC30A2Q9BRI3 323 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 RERGLQ9H628 205 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 KAT8Q9H7Z6 458 aaKnown RBP4.24□□□□□ -1.73
PTCD3-219ENST00000494323 WDR76Q9H967 626 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 POLE4Q9NR33 117 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 PTTG3PQ9NZH4 202 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 RCC2Q9P258 522 aaKnown RBP4.24□□□□□ -1.73
PTCD3-219ENST00000494323 STX18Q9P2W9 335 aaKnown RBP4.24□□□□□ -1.73
PTCD3-219ENST00000494323 RHCGQ9UBD6 479 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 DNAJB9Q9UBS3 223 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 CLN8Q9UBY8 286 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 NDUFAF1Q9Y375 327 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 MED31Q9Y3C7 131 aa4.24□□□□□ -1.73
PTCD3-219ENST00000494323 PRKDCP78527 4128 aaKnown RBP4.23□□□□□ -1.73
PTCD3-219ENST00000494323 TRAV27A0A087WT01 109 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 CENPVL3A0A0U1RRI6 287 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 H3BSA7 217 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 IMPA2O14732 288 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 ANGPT2O15123 496 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 RER1O15258 196 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 PLXNB1O43157 2135 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 IGHV4-59P01825 116 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 ALPLP05186 524 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 MELTFP08582 738 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 IFI30P13284 250 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 TUBG1P23258 451 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 GABRA5P31644 462 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 RBM34P42696 430 aaKnown RBP4.23□□□□□ -1.73
PTCD3-219ENST00000494323 CDKN2AP42771 156 aaKnown RBP4.23□□□□□ -1.73
PTCD3-219ENST00000494323 HTR5AP47898 357 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 PITPNBP48739 271 aa4.23□□□□□ -1.73
PTCD3-219ENST00000494323 SRP9P49458 86 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms