RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 CTSL3PQ5NE16 218 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 SAXO1Q8IYX7 474 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 CADM4Q8NFZ8 388 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 ELOA3Q8NG57 546 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 SLC38A5Q8WUX1 472 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 ZNF689Q96CS4 500 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-205ENST00000493587 PGLYRP3Q96LB9 341 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 AP1S3Q96PC3 154 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 CHST8Q9H2A9 424 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 HS3ST4Q9Y661 456 aa6.1□□□□□ -1.43
VPS13B-205ENST00000493587 TCF20Q9UGU0 1960 aaKnown RBP6.1□□□□□ -1.43
VPS13B-205ENST00000493587 KCNE1BA0A087WTH5 132 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 RIIAD1A6NNX1 92 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 NRG2O14511 850 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-205ENST00000493587 SPINT1O43278 529 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 LEFTY1O75610 366 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 NTN1O95631 604 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 ZBTB25P24278 435 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 GRPRP30550 384 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 KHKP50053 298 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 PDX1P52945 283 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 FOXL2P58012 376 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 PAX2Q02962 417 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 CDK5R1Q15078 307 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 EIPR1Q53HC9 387 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 DMKNQ6E0U4 476 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-205ENST00000493587 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.09□□□□□ -1.43
VPS13B-205ENST00000493587 OR4D11Q8NGI4 311 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 OR2Y1Q8NGV0 311 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 PSMG2Q969U7 264 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 ANKRD9Q96BM1 317 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-205ENST00000493587 SMIM19Q96E16 107 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 ZMYND19Q96E35 227 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-205ENST00000493587 ZNF479Q96JC4 524 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 RAB11FIP5Q9BXF6 653 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 NMNAT2Q9BZQ4 307 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 C1orf198Q9H425 327 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 KCNK15Q9H427 330 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 ETV7Q9Y603 341 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 FITM1A5D6W6 292 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 G3V3Y1 287 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 RBFOX2O43251 390 aaKnown RBP eCLIP6.09□□□□□ -1.43
VPS13B-205ENST00000493587 WNT11O96014 354 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 CT45A8P0DMV1 189 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 CT45A9P0DMV2 189 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 PI3P19957 117 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 ASCL1P50553 236 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 BLKP51451 505 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 RND3P61587 244 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 GNB2P62879 340 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 HERV-K104P63124 156 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 CT45A2Q5DJT8 189 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 ENTPD8Q5MY95 495 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 AMMECR1LQ6DCA0 310 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 FAM220AQ7Z4H9 259 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 KLHDC8AQ8IYD2 350 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 COX18Q8N8Q8 333 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 ZFP62Q8NB50 900 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-205ENST00000493587 CLEC1AQ8NC01 280 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 OR4B1Q8NGF8 309 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 AQP10Q96PS8 301 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 SMIM14Q96QK8 99 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 WFDC6Q9BQY6 131 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 NMES1Q9C002 83 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 TMEM106BQ9NUM4 274 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 STRAPQ9Y3F4 350 aaKnown RBP6.09□□□□□ -1.43
VPS13B-205ENST00000493587 OARD1Q9Y530 152 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 OR51B4Q9Y5P0 310 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 DNAH14Q0VDD8 3507 aa6.09□□□□□ -1.43
VPS13B-205ENST00000493587 K7EQM0 130 aa6.09□□□□□ -1.44
VPS13B-205ENST00000493587 RNASET2O00584 256 aaKnown RBP6.09□□□□□ -1.44
VPS13B-205ENST00000493587 HAND1O96004 215 aa6.09□□□□□ -1.44
VPS13B-205ENST00000493587 OR10J4P0C629 311 aa6.09□□□□□ -1.44
VPS13B-205ENST00000493587 CCNOP22674 350 aa6.09□□□□□ -1.44
VPS13B-205ENST00000493587 MANFP55145 182 aaKnown RBP6.09□□□□□ -1.44
VPS13B-205ENST00000493587 ALG10BQ5I7T1 473 aa6.09□□□□□ -1.44
VPS13B-205ENST00000493587 LHFPL2Q6ZUX7 228 aa6.09□□□□□ -1.44
VPS13B-205ENST00000493587 MDGA2Q7Z553 956 aa6.09□□□□□ -1.44
VPS13B-205ENST00000493587 BOD1L2Q8IYS8 172 aa6.09□□□□□ -1.44
VPS13B-205ENST00000493587 ADAD2Q8NCV1 583 aaKnown RBP6.09□□□□□ -1.44
VPS13B-205ENST00000493587 OR5AR1Q8NGP9 310 aa6.09□□□□□ -1.44
VPS13B-205ENST00000493587 GRHL3Q8TE85 626 aa6.09□□□□□ -1.44
VPS13B-205ENST00000493587 SGK2Q9HBY8 427 aa6.09□□□□□ -1.44
VPS13B-205ENST00000493587 A0A1B0GUS0 222 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 MAP1LC3B2A6NCE7 125 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 FGF10O15520 208 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-205ENST00000493587 PTGER3P43115 390 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 SGSHP51688 502 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 RPL24P83731 157 aaKnown RBP6.08□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF385BQ569K4 471 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 ANKRD16Q6P6B7 361 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 WDR74Q6RFH5 385 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-205ENST00000493587 SLC25A42Q86VD7 318 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 LSRQ86X29 649 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-205ENST00000493587 TMEM256Q8N2U0 113 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 KLHDC1Q8N7A1 406 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 CTHRC1Q96CG8 243 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 ALG14Q96F25 216 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 OR10C1Q96KK4 312 aa6.08□□□□□ -1.44
VPS13B-205ENST00000493587 POM121L2Q96KW2 1035 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms