RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 RBP4P02753 201 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 H2BFMP0C1H6 154 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 PF4V1P10720 104 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 ZNF3P17036 446 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 AZGP1P25311 298 aaKnown RBP8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 OPRL1P41146 370 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 CAPZA1P52907 286 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 HMGA2P52926 109 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 PSME3P61289 254 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 RPL31P62899 125 aaKnown RBP8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 CRMP1Q14194 572 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 SMIM21Q3B7S5 101 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 ARSJQ5FYB0 599 aaPredicted RBP8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 LCN1P1Q5VSP4 162 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 CGB2Q6NT52 195 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 LYPD4Q6UWN0 246 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 THAP5Q7Z6K1 395 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 LYG1Q8N1E2 194 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 ZNF561Q8N587 486 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 OR2T33Q8NG76 320 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 HPSE2Q8WWQ2 592 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 PIGCQ92535 297 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 CMTM5Q96DZ9 223 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 WWC2-AS2Q96NR7 200 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 C19orf12Q9NSK7 152 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 TBC1D23Q9NUY8 699 aa8.89□□□□□ -0.99
SNRNP200-207ENST00000493271 COL7A1Q02388 2944 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 A6NDX4 124 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 RIIAD1A6NNX1 92 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 E9PQ18 207 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 MTRF1O75570 445 aaKnown RBP8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 CLIC3O95833 236 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 ATP6V1B1P15313 513 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 ACKR3P25106 362 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 VDAC2P45880 294 aaPredicted RBP8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 MAP2K3P46734 347 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 CD83Q01151 205 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 CEACAM21Q3KPI0 293 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 LINC01590Q5TEZ4 76 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 C11orf42Q8N5U0 333 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 ZNF454Q8N9F8 522 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 CCDC197Q8NCU1 140 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 OR5A2Q8NGI9 324 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 OR13D1Q8NGV5 346 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 OR6N2Q8NGY6 317 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 TSSK6Q9BXA6 273 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 OR51I2Q9H344 312 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 PPP1R3EQ9H7J1 279 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 ELL3Q9HB65 397 aaPredicted RBP8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 DNAJC27Q9NZQ0 273 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 ZNF319Q9P2F9 582 aa8.88□□□□□ -0.99
SNRNP200-207ENST00000493271 K7EIL1 84 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 RHBDL1O75783 438 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 PF4P02776 101 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 GYPBP06028 91 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 LYNP07948 512 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 HSD17B1P14061 328 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 IGLL1P15814 213 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 GSTT1P30711 240 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 GPM6AP51674 278 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 PSMA6P60900 246 aaKnown RBP8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 HABP2Q14520 560 aaPredicted RBP8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 ZBTB37Q5TC79 503 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 TMEM200BQ69YZ2 307 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 C16orf82Q7Z2V1 217 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 ERI1Q8IV48 349 aaKnown RBP8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 OR8D4Q8NGM9 314 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 FAM81AQ8TBF8 368 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 DPF1Q92782 380 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 AKR1E2Q96JD6 320 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 NSMCE2Q96MF7 247 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 C1orf21Q9H246 121 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 BRD7Q9NPI1 651 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 CMC2Q9NRP2 79 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 ZMAT5Q9UDW3 170 aaKnown RBP8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 V9GYQ6 96 aa8.87□□□□□ -0.99
SNRNP200-207ENST00000493271 A0A0U1RQV5 110 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 ACOD1A6NK06 481 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 RFPL4AA6NLU0 287 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 C17orf98A8MV24 154 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 ODF3BA8MYP8 253 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 ZNF732B4DXR9 585 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 RFPL4AL1F8VTS6 287 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 NOS1APO75052 506 aaPredicted RBP8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 ARG1P05089 322 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 COX7A1P24310 79 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 PRDX6P30041 224 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 OR12D2P58182 307 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 CD69Q07108 199 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 SF3A3Q12874 501 aaKnown RBP eCLIP8.86□□□□□ -0.996e-9■■■■■ 32.1
SNRNP200-207ENST00000493271 MINOS1Q5TGZ0 78 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 ZNF626Q68DY1 528 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 LCN8Q6JVE9 175 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 ACP7Q6ZNF0 438 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 PIGWQ7Z7B1 504 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 POC1AQ8NBT0 407 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 OR5AU1Q8NGC0 362 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 OR11H6Q8NGC7 330 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 OR2T27Q8NH04 317 aa8.86□□□□□ -0.99
SNRNP200-207ENST00000493271 OTOSQ8NHW6 89 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms