RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 CCL13Q99616 98 aa5.97□□□□□ -1.45
PDLIM1-204ENST00000492511 ALG8Q9BVK2 526 aa5.97□□□□□ -1.45
PDLIM1-204ENST00000492511 FGF20Q9NP95 211 aaPredicted RBP5.97□□□□□ -1.45
PDLIM1-204ENST00000492511 C8orf4Q9NR00 106 aa5.97□□□□□ -1.45
PDLIM1-204ENST00000492511 SNTG1Q9NSN8 517 aa5.97□□□□□ -1.45
PDLIM1-204ENST00000492511 ERVK13-1Q9NX77 482 aa5.97□□□□□ -1.45
PDLIM1-204ENST00000492511 KAAG1Q9UBP8 84 aa5.97□□□□□ -1.45
PDLIM1-204ENST00000492511 RPL36Q9Y3U8 105 aaKnown RBP5.97□□□□□ -1.45
PDLIM1-204ENST00000492511 PCDHGB1Q9Y5G3 927 aa5.97□□□□□ -1.45
PDLIM1-204ENST00000492511 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.97□□□□□ -1.45
PDLIM1-204ENST00000492511 IGKV1-27A0A075B6S5 117 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 IGHV2-70DA0A0C4DH43 119 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 IGKV1-9A0A0C4DH69 117 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 A0A1B0GVI7 797 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 LOC107986453A0A1B0GWG9 222 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 SNTNA6NMZ2 147 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 OR4C45A6NMZ5 311 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 DVL1O14640 695 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 SYT7O43581 403 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 NDUFA2O43678 99 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 SYNGR1O43759 233 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 ISG15P05161 165 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 LIMS3P0CW19 117 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 LIMS4P0CW20 117 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 SELLP14151 372 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 MUC1P15941 1255 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 ETV1P50549 477 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 CCR9P51686 369 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 GMFBP60983 142 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 SLC34A1Q06495 639 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 ALKBH1Q13686 389 aaKnown RBP5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 KCNJ8Q15842 424 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 MICBQ29980 383 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 ATPAF1Q5TC12 328 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 TTC23Q5W5X9 447 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 PLCXD3Q63HM9 321 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 STUMQ69YW2 141 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 HAGHLQ6PII5 290 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 CALHM1Q8IU99 346 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 EGFL6Q8IUX8 553 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 SYS1Q8N2H4 156 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 DHRSXQ8N5I4 330 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 OR51A4Q8NGJ6 313 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 ANGPTL6Q8NI99 470 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 FBLIM1Q8WUP2 373 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 GGHQ92820 318 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 ADAT3Q96EY9 351 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 ZNF488Q96MN9 340 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 ADI1Q9BV57 179 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 JAM3Q9BX67 310 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 DCLRE1BQ9H816 532 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 CLN8Q9UBY8 286 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 METRNQ9UJH8 293 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 SOX21Q9Y651 276 aaPredicted RBP5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 AUP1Q9Y679 476 aa5.96□□□□□ -1.46
PDLIM1-204ENST00000492511 IGKV1D-17A0A075B6S4 117 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 ANKRD61A6NGH8 418 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 ERICH4A6NGS2 130 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 OR5B21A6NL26 309 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 F8VVB4 439 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 F8VWA3 439 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 H0YAE9 185 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 TMPRSS2O15393 492 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 NOS1APO75052 506 aaPredicted RBP5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 VENTXO95231 258 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 FADS2O95864 444 aaKnown RBP5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 HTR1AP08908 422 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 UBCP0CG48 685 aaKnown RBP5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 PGA5P0DJD9 388 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 IGHV4-38-2P0DP08 117 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 PSG2P11465 335 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 MMP9P14780 707 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 EPHA1P21709 976 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 MPZP25189 248 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 CAPGP40121 348 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 HAAOP46952 286 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 NPY4RP50391 375 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 GTF2A1P52655 376 aaPredicted RBP5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 ERVK11-1P61568 191 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 ACTA2P62736 377 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 ACTG2P63267 376 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 DOC2BQ14184 412 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 DGUOKQ16854 277 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 KRTAP24-1Q3LI83 254 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 KLHL22Q53GT1 634 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 TMEM244Q5VVB8 128 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 XAF1Q6GPH4 301 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 CRIP3Q6Q6R5 217 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 ZNF788Q6ZQV5 615 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 BTN2A1Q7KYR7 527 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 NLRC3Q7RTR2 1065 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 RNF144BQ7Z419 303 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 FAM220AQ7Z4H9 259 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 ANGPTL5Q86XS5 388 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 BCL6BQ8N143 479 aaPredicted RBP5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 FAM216BQ8N7L0 139 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 POC1AQ8NBT0 407 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 ZNF485Q8NCK3 441 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 LY6G5BQ8NDX9 201 aa5.95□□□□□ -1.46
PDLIM1-204ENST00000492511 CCDC54Q8NEL0 328 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms