RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 RAC3P60763 192 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 PSG4Q00888 419 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 TRA2AQ13595 282 aaKnown RBP eCLIP10.85□□□□□ -0.678e-24■■□□□ 11.7
HMGN1-220ENST00000492280 IGFBP7Q16270 282 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 PXDC1Q5TGL8 231 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 VASH2Q86V25 355 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 GPR137CQ8N3F9 429 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 ZDHHC22Q8N966 263 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 DTWD2Q8NBA8 298 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 PSMF1Q92530 271 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 DCUN1D4Q92564 292 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 RTBDNQ9BSG5 229 aaPredicted RBP10.85□□□□□ -0.67
HMGN1-220ENST00000492280 KIF25Q9UIL4 384 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 V9GYS6 101 aa10.85□□□□□ -0.67
HMGN1-220ENST00000492280 KANTRA0A1W2PQU2 76 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 C9orf172C9J069 976 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 F5H0A9 414 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-220ENST00000492280 SYNGR3O43761 229 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 VAMP5O95183 116 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 PRF1P14222 555 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 SRD5A2P31213 254 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 OTX1P32242 354 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-220ENST00000492280 THBS4P35443 961 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 ATP1A1-AS1Q5TC04 95 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 PEAR1Q5VY43 1037 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-220ENST00000492280 C6orf15Q6UXA7 325 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-220ENST00000492280 SLC51BQ86UW2 128 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 OR5M9Q8NGP3 310 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 OR6K3Q8NGY3 331 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 SPTSSAQ969W0 71 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 OR10C1Q96KK4 312 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 FOXB1Q99853 325 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 OR51B6Q9H340 312 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 LIME1Q9H400 295 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 CHMP1AQ9HD42 196 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-220ENST00000492280 TMEM38BQ9NVV0 291 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 PLEKHJ1Q9NW61 149 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 GSKIPQ9P0R6 139 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 LRFN1Q9P244 771 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 KIAA2026Q5HYC2 2103 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 A0A0B4J2A0 478 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 SERPINA5P05154 406 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 GSTP1P09211 210 aaKnown RBP10.84□□□□□ -0.67
HMGN1-220ENST00000492280 CRYGSP22914 178 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 CYB561P49447 251 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 ARPC4P59998 168 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 ZNF92Q03936 586 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 SLC16A14Q7RTX9 510 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 GLRX5Q86SX6 157 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 TMEM17Q86X19 198 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 SKA3Q8IX90 412 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 SEMA6DQ8NFY4 1073 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 HAS2Q92819 552 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 TOMM40LQ969M1 308 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 OR5AC2Q9NZP5 309 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 ZNF629Q9UEG4 869 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-220ENST00000492280 SHPKQ9UHJ6 478 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 GPR132Q9UNW8 380 aa10.84□□□□□ -0.67
HMGN1-220ENST00000492280 MED12LQ86YW9 2145 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 IGKV1-12A0A0C4DH73 117 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 A0A0U1RQV5 110 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 IGKV1D-12P01611 117 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 NAT2P11245 290 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 MRPS34P82930 218 aaKnown RBP10.83□□□□□ -0.68
HMGN1-220ENST00000492280 BTN1A1Q13410 526 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 CHRFAM7AQ494W8 412 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 TSPO2Q5TGU0 170 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 FAM27BQ5VT28 67 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 OR1F12Q8NHA8 337 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 OR2V1Q8NHB1 315 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 C17orf50Q8WW18 174 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 SLC6A15Q9H2J7 730 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 FBLN5Q9UBX5 448 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 PFDN2Q9UHV9 154 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 PCDHGA1Q9Y5H4 931 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 GTF3C1Q12789 2109 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 GEMIN2O14893 280 aaKnown RBP10.83□□□□□ -0.68
HMGN1-220ENST00000492280 DUS4LO95620 317 aaKnown RBP10.83□□□□□ -0.68
HMGN1-220ENST00000492280 CRHP06850 196 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 SFTPBP07988 381 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 NUP62P37198 522 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-220ENST00000492280 S100A10P60903 97 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 IKZF1Q13422 519 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 PDZD9Q8IXQ8 264 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 ZSCAN4Q8NAM6 433 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-220ENST00000492280 THAP6Q8TBB0 222 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 MARS2Q96GW9 593 aaKnown RBP10.83□□□□□ -0.68
HMGN1-220ENST00000492280 SGCZQ96LD1 299 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 PPA2Q9H2U2 334 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 CALHM2Q9HA72 323 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 ZNF107Q9UII5 783 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-220ENST00000492280 SPEF1Q9Y4P9 236 aa10.83□□□□□ -0.68
HMGN1-220ENST00000492280 ZNF503-AS2A6NEH8 195 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 FOXI3A8MTJ6 420 aaPredicted RBP10.82□□□□□ -0.68
HMGN1-220ENST00000492280 PTGER4P35408 488 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 FXYD4P59646 89 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 HIST1H3AP68431 136 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 RSU1Q15404 277 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 TMEM128Q5BJH2 165 aa10.82□□□□□ -0.68
HMGN1-220ENST00000492280 HIST2H3PS2Q5TEC6 136 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms