RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 OR2T27Q8NH04 317 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 OR51E1Q8TCB6 317 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 STMN2Q93045 179 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 ZNF48Q96MX3 618 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 RDH12Q96NR8 316 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 IL4I1Q96RQ9 567 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 RIBC2Q9H4K1 309 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 PRDM13Q9H4Q3 707 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 PLEKHA1Q9HB21 404 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 SMURF1Q9HCE7 757 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 S100A14Q9HCY8 104 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 GPR84Q9NQS5 396 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 FAM206AQ9NX38 181 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 SLC25A10Q9UBX3 287 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 SLC7A11Q9UPY5 501 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 PCDHGB1Q9Y5G3 927 aa13.71□□□□□ -0.21
PDLIM2-217ENST00000491330 DNHD1Q96M86 4753 aa13.71□□□□□ -0.22
PDLIM2-217ENST00000491330 CENPVL3A0A0U1RRI6 287 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 SAC3D1A6NKF1 404 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 OR2AT4A6NND4 320 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 DHRS7CA6NNS2 312 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 SLC1A7O00341 560 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 SULT1C4O75897 302 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 SERPINA3P01011 423 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 FBP1P09467 338 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 ACKR3P25106 362 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 TUSC1Q2TAM9 212 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 SMIM21Q3B7S5 101 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 CEP78Q5JTW2 689 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 NCR3LG1Q68D85 454 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 WDR86Q86TI4 376 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 FAM216BQ8N7L0 139 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 YIPF7Q8N8F6 280 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 TBX15Q96SF7 602 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 DCTN5Q9BTE1 182 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 UNKLQ9H9P5 680 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 ADGRL4Q9HBW9 690 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 TNFRSF19Q9NS68 423 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 SNTG1Q9NSN8 517 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 KLHDC2Q9Y2U9 406 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 R4GMQ9 66 aa13.7□□□□□ -0.22
PDLIM2-217ENST00000491330 DLGAP1O14490 977 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 EI24O14681 340 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 KNG1P01042 644 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 TGM4P49221 684 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 CAV3P56539 151 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 SNRPGP62308 76 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 ACTC1P68032 377 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 ACTA1P68133 377 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 STUMQ69YW2 141 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 FIP1L1Q6UN15 594 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 GDPGP1Q6ZNW5 385 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 C1orf122Q6ZSJ8 110 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 FAM220AQ7Z4H9 259 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 VMO1Q7Z5L0 202 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 PQLC1Q8N2U9 271 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 TMEM185AQ8NFB2 350 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 OR51G2Q8NGK0 314 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 DYRK2Q92630 601 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 MRPL48Q96GC5 212 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 LYZL4Q96KX0 146 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 SIRPDQ9H106 197 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 SLITRK2Q9H156 845 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 METTL8Q9H825 291 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 OR52A1Q9UKL2 312 aa13.69□□□□□ -0.22
PDLIM2-217ENST00000491330 TRBV23-1A0A0A0MS06 115 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 H0YAE9 185 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 SIGLEC5O15389 551 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 IGLV3-1P01715 115 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 RPSAP08865 295 aaKnown RBP13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 ACAA1P09110 424 aaPredicted RBP13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 MMP9P14780 707 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 ANOS1P23352 680 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 OCLNQ16625 522 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 ZSCAN26Q16670 478 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 HAGHLQ6PII5 290 aaPredicted RBP13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 METAP1DQ6UB28 335 aaPredicted RBP13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 ZNF788Q6ZQV5 615 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 PLEKHG7Q6ZR37 379 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 ZBTB49Q6ZSB9 765 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 KCTD20Q7Z5Y7 419 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 ELMOD2Q8IZ81 293 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 DTX3Q8N9I9 347 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 LY6G5BQ8NDX9 201 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 OR5D13Q8NGL4 314 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 OR51I2Q9H344 312 aa13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.68□□□□□ -0.22
PDLIM2-217ENST00000491330 FAM181BA6NEQ2 426 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 E9PQ18 207 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 M0R1W7 72 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 GATBO75879 557 aaKnown RBP13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 MELTFP08582 738 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 OCM2P0CE71 109 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 OCMP0CE72 109 aaPredicted RBP13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 FAHP16930 419 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 HAAOP46952 286 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 HOXA4Q00056 320 aaPredicted RBP13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 RUSC1-AS1Q66K80 236 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 CBR4Q8N4T8 237 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 ANGPTL6Q8NI99 470 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms