RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 ZNF488Q96MN9 340 aa12.6□□□□□ -0.39
COL2A1-207ENST00000490609 SERTAD4Q9NUC0 356 aa12.6□□□□□ -0.39
COL2A1-207ENST00000490609 SF3B6Q9Y3B4 125 aaKnown RBP12.6□□□□□ -0.39
COL2A1-207ENST00000490609 A0A1W2PQ09 198 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 NKX6-3A6NJ46 265 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 FAM90A8PA6NJQ4 464 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 DLX6P56179 175 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 CDK5Q00535 292 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 HABP2Q14520 560 aaPredicted RBP12.59□□□□□ -0.39
COL2A1-207ENST00000490609 GINS1Q14691 196 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 AANATQ16613 207 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 LRRC75BQ2VPJ9 315 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 C16orf89Q6UX73 402 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 ACP7Q6ZNF0 438 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 KCTD8Q6ZWB6 473 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 LHFPL4Q7Z7J7 247 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 CPOQ8IVL8 374 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 OTULINQ96BN8 352 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 REEP1Q9H902 201 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 ZNF702PQ9H963 129 aa12.59□□□□□ -0.39
COL2A1-207ENST00000490609 TRBV23-1A0A0A0MS06 115 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 A0A0U1RQV5 110 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 RFPL4AA6NLU0 287 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 RFPL4AL1F8VTS6 287 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 SYNGR1O43759 233 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 ANGPTL7O43827 346 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 CCL3L1P16619 93 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 POU1F1P28069 291 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 CEBPDP49716 269 aaPredicted RBP12.58□□□□□ -0.4
COL2A1-207ENST00000490609 RAB13P51153 203 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 BMXP51813 675 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 GYS2P54840 703 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 GNG3P63215 75 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 TRIM25Q14258 630 aaKnown RBP12.58□□□□□ -0.4
COL2A1-207ENST00000490609 HSP90B2PQ58FF3 399 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 OXLD1Q5BKU9 147 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 Q6ZS46 218 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 HS3ST5Q8IZT8 346 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 ZNF454Q8N9F8 522 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 TMEM185AQ8NFB2 350 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 OR5D13Q8NGL4 314 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 OR5K1Q8NHB7 308 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 TEX47Q8TBZ9 253 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 ABCB9Q9NP78 766 aa12.58□□□□□ -0.4
COL2A1-207ENST00000490609 H0YAE9 185 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 PSMD9O00233 223 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 SRSF10O75494 262 aaKnown RBP12.57□□□□□ -0.4
COL2A1-207ENST00000490609 T-ENOLP0DO92 83 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 CD28P10747 220 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 ZNF273Q14593 569 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 SNCBQ16143 134 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 Q6ZTK2 550 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 THAP5Q7Z6K1 395 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 DHFR2Q86XF0 187 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.57□□□□□ -0.4
COL2A1-207ENST00000490609 ADGRG5Q8IZF4 528 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 FAM185AQ8N0U4 392 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 Q8N2B8 174 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 FTMTQ8N4E7 242 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 OR5A2Q8NGI9 324 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 OR51G2Q8NGK0 314 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 GIPC3Q8TF64 312 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 TEAD3Q99594 435 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 RANBP3Q9H6Z4 567 aaPredicted RBP12.57□□□□□ -0.4
COL2A1-207ENST00000490609 COPS3Q9UNS2 423 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 ZNF281Q9Y2X9 895 aa12.57□□□□□ -0.4
COL2A1-207ENST00000490609 ARRDC5A6NEK1 342 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 CCDC182A6NF36 153 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 VGLL3A8MV65 326 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 B2RBV5 119 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 PRR23D1E9PI22 279 aaPredicted RBP12.56□□□□□ -0.4
COL2A1-207ENST00000490609 H3BN98 237 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 PRODHO43272 600 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 PGA5P0DJD9 388 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 PRR23D2P0DMB1 279 aaPredicted RBP12.56□□□□□ -0.4
COL2A1-207ENST00000490609 FAHP16930 419 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 JUNBP17275 347 aaPredicted RBP12.56□□□□□ -0.4
COL2A1-207ENST00000490609 MAP2K3P46734 347 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 MFGE8Q08431 387 aaPredicted RBP12.56□□□□□ -0.4
COL2A1-207ENST00000490609 FAM189A2Q15884 450 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 TMEM236Q5W0B7 351 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 TMEM42Q69YG0 159 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 HAGHLQ6PII5 290 aaPredicted RBP12.56□□□□□ -0.4
COL2A1-207ENST00000490609 MOB3CQ70IA8 216 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 CPLX4Q7Z7G2 160 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 POC1AQ8NBT0 407 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 OR4M1Q8NGD0 313 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 OR51E1Q8TCB6 317 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 CHID1Q9BWS9 393 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 MMP28Q9H239 520 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 NIPAL2Q9H841 368 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 HES4Q9HCC6 221 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 GPR84Q9NQS5 396 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 RASL12Q9NYN1 266 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 ARL2BPQ9Y2Y0 163 aa12.56□□□□□ -0.4
COL2A1-207ENST00000490609 C17orf98A8MV24 154 aa12.55□□□□□ -0.4
COL2A1-207ENST00000490609 NOS1APO75052 506 aaPredicted RBP12.55□□□□□ -0.4
COL2A1-207ENST00000490609 VSIG10L2P0DP72 767 aa12.55□□□□□ -0.4
COL2A1-207ENST00000490609 PRKACGP22612 351 aa12.55□□□□□ -0.4
COL2A1-207ENST00000490609 PRDX2P32119 198 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms