RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 APOL3O95236 402 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 ALPLP05186 524 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 RNASE1P07998 156 aaKnown RBP14.43□□□□□ -0.1
SEC13-218ENST00000490283 MMP9P14780 707 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 CFPP27918 469 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 GABRA2P47869 451 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 ALDH3A2P51648 485 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 CDONQ4KMG0 1287 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 AQP3Q92482 292 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 LHX4Q969G2 390 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 EME1Q96AY2 570 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 TBX15Q96SF7 602 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 FGF23Q9GZV9 251 aaPredicted RBP14.43□□□□□ -0.1
SEC13-218ENST00000490283 NOX4Q9NPH5 578 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 RASL12Q9NYN1 266 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 SLC25A10Q9UBX3 287 aaPredicted RBP14.43□□□□□ -0.1
SEC13-218ENST00000490283 POLDIP2Q9Y2S7 368 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 V9GYS6 101 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 FBN3Q75N90 2809 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 DOCK11Q5JSL3 2073 aa14.43□□□□□ -0.1
SEC13-218ENST00000490283 A0A1B0GW55 424 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 RHBDL1O75783 438 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 DUX4L2P0CJ85 424 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 DUX4L3P0CJ86 424 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 DUX4L4P0CJ87 422 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 DUX4L5P0CJ88 424 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 DUX4L6P0CJ89 424 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 DUX4L7P0CJ90 424 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 HKR1P10072 659 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 NDUFB7P17568 137 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 HAAOP46952 286 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 TGM4P49221 684 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 ACTC1P68032 377 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 ACTA1P68133 377 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 ELF3P78545 371 aaPredicted RBP14.42□□□□□ -0.1
SEC13-218ENST00000490283 SLC9A3R2Q15599 337 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 ODF4Q2M2E3 257 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 DEFB112Q30KQ8 113 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 SMIM21Q3B7S5 101 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 MEDAGQ5VYS4 303 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 RUSC1-AS1Q66K80 236 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 DUX4L9Q6RFH8 374 aaPredicted RBP14.42□□□□□ -0.1
SEC13-218ENST00000490283 ZNF788Q6ZQV5 615 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 SSX6Q7RTT6 188 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 CCDC54Q8NEL0 328 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 OR14K1Q8NGZ2 314 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 ANGPTL6Q8NI99 470 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 HRASLS5Q96KN8 279 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 GAFA1Q96PS6 74 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 DCTN5Q9BTE1 182 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 SIRPDQ9H106 197 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 GPR173Q9NS66 373 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 DUX4Q9UBX2 424 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 GNG8Q9UK08 70 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 SLC7A11Q9UPY5 501 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 SLC22A13Q9Y226 551 aa14.42□□□□□ -0.1
SEC13-218ENST00000490283 IGHV1-69DA0A0B4J2H0 117 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 CENPVL3A0A0U1RRI6 287 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 A0A1W2PQ09 198 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 H3BNX3 289 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 J3QT63 122 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 SIGLEC5O15389 551 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 SYT7O43581 403 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 IGHV1-69P01742 117 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 ACAA1P09110 424 aaPredicted RBP14.41□□□□□ -0.1
SEC13-218ENST00000490283 ZIK1Q3SY52 487 aaPredicted RBP14.41□□□□□ -0.1
SEC13-218ENST00000490283 AWAT1Q58HT5 328 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 DMRTC1Q5HYR2 192 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 CATSPERDQ86XM0 798 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 CBR4Q8N4T8 237 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 KIR3DL3Q8N743 410 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 LY6G5BQ8NDX9 201 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 TMEM185AQ8NFB2 350 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 MYCBPQ99417 103 aaPredicted RBP14.41□□□□□ -0.1
SEC13-218ENST00000490283 C9orf16Q9BUW7 83 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 ACOXLQ9NUZ1 547 aa14.41□□□□□ -0.1
SEC13-218ENST00000490283 A0A1B0GTI1 187 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 MDFIC2A0A1B0GVS7 189 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 ANKRD61A6NGH8 418 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 HOXA3O43365 443 aaPredicted RBP14.4□□□□□ -0.1
SEC13-218ENST00000490283 FCN3O75636 299 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 GATBO75879 557 aaKnown RBP14.4□□□□□ -0.1
SEC13-218ENST00000490283 SERPINA3P01011 423 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 UBCP0CG48 685 aaKnown RBP14.4□□□□□ -0.1
SEC13-218ENST00000490283 SELLP14151 372 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 CCL1P22362 96 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 CAPZA1P52907 286 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 CAV3P56539 151 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 BLMHQ13867 455 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 TMEM42Q69YG0 159 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 VMO1Q7Z5L0 202 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 FGFRL1Q8N441 504 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 POC1AQ8NBT0 407 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 MRPL48Q96GC5 212 aaKnown RBP14.4□□□□□ -0.1
SEC13-218ENST00000490283 C1orf147Q96MC9 270 aaPredicted RBP14.4□□□□□ -0.1
SEC13-218ENST00000490283 CAB39Q9Y376 341 aaPredicted RBP14.4□□□□□ -0.1
SEC13-218ENST00000490283 PCDHGB1Q9Y5G3 927 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 GMPPBQ9Y5P6 360 aa14.4□□□□□ -0.1
SEC13-218ENST00000490283 SOX21Q9Y651 276 aaPredicted RBP14.4□□□□□ -0.1
SEC13-218ENST00000490283 ANK2Q01484 3957 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms