RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 XRCC2O43543 280 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 MPDU1O75352 247 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 CTAG2O75638 210 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 PTHP01270 115 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 IGHMP01871 453 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 FOXA1P55317 472 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 ATP5G2Q06055 141 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 CTAGE6Q86UF2 777 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 WDR31Q8NA23 367 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 Q8NDZ9 215 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 JSRP1Q96MG2 331 aaPredicted RBP1.82□□□□□ -2.12
CCDC39-206ENST00000489868 CSPG4P5Q96PW8 444 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 C11orf70Q9BRQ4 267 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 ABCG5Q9H222 651 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 OR51B2Q9Y5P1 312 aa1.82□□□□□ -2.12
CCDC39-206ENST00000489868 CCDC169A6NNP5 214 aa1.81□□□□□ -2.12
CCDC39-206ENST00000489868 D6RAR5 112 aa1.81□□□□□ -2.12
CCDC39-206ENST00000489868 DNAJB6O75190 326 aa1.81□□□□□ -2.12
CCDC39-206ENST00000489868 GNRHRP30968 328 aa1.81□□□□□ -2.12
CCDC39-206ENST00000489868 KIF2BQ8N4N8 673 aa1.81□□□□□ -2.12
CCDC39-206ENST00000489868 OR1S1Q8NH92 325 aa1.81□□□□□ -2.12
CCDC39-206ENST00000489868 YIPF5Q969M3 257 aa1.81□□□□□ -2.12
CCDC39-206ENST00000489868 ISG20Q96AZ6 181 aaKnown RBP1.81□□□□□ -2.12
CCDC39-206ENST00000489868 RCN3Q96D15 328 aa1.81□□□□□ -2.12
CCDC39-206ENST00000489868 OPALINQ96PE5 141 aa1.81□□□□□ -2.12
CCDC39-206ENST00000489868 NAA50Q9GZZ1 169 aaKnown RBP1.81□□□□□ -2.12
CCDC39-206ENST00000489868 ARV1Q9H2C2 271 aa1.81□□□□□ -2.12
CCDC39-206ENST00000489868 CD209Q9NNX6 404 aa1.81□□□□□ -2.12
CCDC39-206ENST00000489868 TMEM38BQ9NVV0 291 aa1.81□□□□□ -2.12
CCDC39-206ENST00000489868 RAB20Q9NX57 234 aa1.81□□□□□ -2.12
CCDC39-206ENST00000489868 COL11A1P12107 1806 aaPredicted RBP1.8□□□□□ -2.12
CCDC39-206ENST00000489868 ENTPD6O75354 484 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 RPS5P46782 204 aaKnown RBP1.8□□□□□ -2.12
CCDC39-206ENST00000489868 ATP6V0D1P61421 351 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 IL5RAQ01344 420 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 RAD51Q06609 339 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 LRRC74AQ0VAA2 488 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 LINC00303Q3SY05 128 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 TMEM144Q7Z5S9 345 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 ITPRIPQ8IWB1 547 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 DAW1Q8N136 415 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 CA5BP1Q8WTZ4 195 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 MRPL48Q96GC5 212 aaKnown RBP1.8□□□□□ -2.12
CCDC39-206ENST00000489868 OR51B5Q9H339 312 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 RDH14Q9HBH5 336 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 AHSPQ9NZD4 102 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 ENPP4Q9Y6X5 453 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 SSH2Q76I76 1423 aa1.8□□□□□ -2.12
CCDC39-206ENST00000489868 COL5A3P25940 1745 aaPredicted RBP1.8□□□□□ -2.12
CCDC39-206ENST00000489868 CACNA1GO43497 2377 aa1.79□□□□□ -2.12
CCDC39-206ENST00000489868 A0A1W2PRD5 423 aa1.79□□□□□ -2.12
CCDC39-206ENST00000489868 MYL12BO14950 172 aa1.79□□□□□ -2.12
CCDC39-206ENST00000489868 TEAD1P28347 426 aa1.79□□□□□ -2.12
CCDC39-206ENST00000489868 ERFP50548 548 aa1.79□□□□□ -2.12
CCDC39-206ENST00000489868 C5orf64Q2M2E5 130 aa1.79□□□□□ -2.12
CCDC39-206ENST00000489868 MRPL2Q5T653 305 aaKnown RBP1.79□□□□□ -2.12
CCDC39-206ENST00000489868 NDUFAF7Q7L592 441 aa1.79□□□□□ -2.12
CCDC39-206ENST00000489868 C9orf72Q96LT7 481 aa1.79□□□□□ -2.12
CCDC39-206ENST00000489868 STMN4Q9H169 189 aaPredicted RBP1.79□□□□□ -2.12
CCDC39-206ENST00000489868 DEFB129Q9H1M3 183 aa1.79□□□□□ -2.12
CCDC39-206ENST00000489868 PRSS16Q9NQE7 514 aa1.79□□□□□ -2.12
CCDC39-206ENST00000489868 RRP15Q9Y3B9 282 aaKnown RBP1.79□□□□□ -2.12
CCDC39-206ENST00000489868 JCADQ9P266 1359 aa1.79□□□□□ -2.12
CCDC39-206ENST00000489868 FBN3Q75N90 2809 aa1.79□□□□□ -2.12
CCDC39-206ENST00000489868 TRAV8-6A0A0B4J262 113 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 OR8G3PP0DMU2 310 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 PTMSP20962 102 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 CFHR2P36980 270 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 GPR1P46091 355 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 TUFMP49411 452 aaKnown RBP1.78□□□□□ -2.12
CCDC39-206ENST00000489868 ADIGQ0VDE8 80 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 CUL2Q13617 745 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 MAPRE2Q15555 327 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 BEX5Q5H9J7 111 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 PAGE2Q7Z2X7 111 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 TNFRSF14Q92956 283 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 ZNF75AQ96N20 296 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 AUNIPQ9H7T9 357 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 RAB23Q9ULC3 237 aa1.78□□□□□ -2.12
CCDC39-206ENST00000489868 VWA8A3KMH1 1905 aa1.78□□□□□ -2.13
CCDC39-206ENST00000489868 BRD4O60885 1362 aaPredicted RBP1.77□□□□□ -2.13
CCDC39-206ENST00000489868 LRRIQ4A6NIV6 560 aa1.77□□□□□ -2.13
CCDC39-206ENST00000489868 IGLL5B9A064 214 aa1.77□□□□□ -2.13
CCDC39-206ENST00000489868 UPK1BO75841 260 aa1.77□□□□□ -2.13
CCDC39-206ENST00000489868 PTTG1O95997 202 aa1.77□□□□□ -2.13
CCDC39-206ENST00000489868 GFAPP14136 432 aa1.77□□□□□ -2.13
CCDC39-206ENST00000489868 CD99P14209 185 aa1.77□□□□□ -2.13
CCDC39-206ENST00000489868 PRPS1L1P21108 318 aa1.77□□□□□ -2.13
CCDC39-206ENST00000489868 FBXL19-AS1Q494R0 122 aa1.77□□□□□ -2.13
CCDC39-206ENST00000489868 SPNS3Q6ZMD2 512 aa1.77□□□□□ -2.13
CCDC39-206ENST00000489868 TRMT10CQ7L0Y3 403 aaKnown RBP1.77□□□□□ -2.13
CCDC39-206ENST00000489868 PRNTQ86SH4 94 aa1.77□□□□□ -2.13
CCDC39-206ENST00000489868 EIF4E3Q8N5X7 224 aaKnown RBP1.77□□□□□ -2.13
CCDC39-206ENST00000489868 Q96MT0 163 aa1.77□□□□□ -2.13
CCDC39-206ENST00000489868 GABRG3Q99928 467 aa1.77□□□□□ -2.13
CCDC39-206ENST00000489868 VWDEQ8N2E2 1590 aa1.76□□□□□ -2.13
CCDC39-206ENST00000489868 DYSFO75923 2080 aa1.76□□□□□ -2.13
CCDC39-206ENST00000489868 NSD2O96028 1365 aa1.76□□□□□ -2.13
CCDC39-206ENST00000489868 TRAV25A0A0B4J276 109 aa1.76□□□□□ -2.13
CCDC39-206ENST00000489868 A0A1W2PNM2 257 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms