RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 FGF23Q9GZV9 251 aaPredicted RBP7.22□□□□□ -1.25
SSBP1-212ENST00000489378 YY1AP1Q9H869 796 aa7.22□□□□□ -1.25
SSBP1-212ENST00000489378 SP140LQ9H930 580 aa7.22□□□□□ -1.25
SSBP1-212ENST00000489378 ZFP57Q9NU63 452 aa7.22□□□□□ -1.25
SSBP1-212ENST00000489378 CYB5R1Q9UHQ9 305 aa7.22□□□□□ -1.25
SSBP1-212ENST00000489378 LYVE1Q9Y5Y7 322 aa7.22□□□□□ -1.25
SSBP1-212ENST00000489378 A0A1W2PPH5 198 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 MEX3AA1L020 520 aaKnown RBP7.21□□□□□ -1.25
SSBP1-212ENST00000489378 DBX1A6NMT0 343 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 C17orf98A8MV24 154 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 MYF6P23409 242 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 DDOSTP39656 456 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 OR3A4PP47883 348 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 FAM3AP98173 230 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 SEC23BQ15437 767 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 ZBED5Q49AG3 693 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 C16orf89Q6UX73 402 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 CYB561A3Q8NBI2 242 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 OR13D1Q8NGV5 346 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 CAPSLQ8WWF8 208 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 SPSB4Q96A44 273 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 SDSLQ96GA7 329 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 AKR1E2Q96JD6 320 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 NOL4LQ96MY1 436 aaPredicted RBP7.21□□□□□ -1.25
SSBP1-212ENST00000489378 CENPOQ9BU64 300 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 RHCGQ9UBD6 479 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 A4GNTQ9UNA3 340 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 B9D1Q9UPM9 204 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 RHBDD3Q9Y3P4 386 aa7.21□□□□□ -1.25
SSBP1-212ENST00000489378 OR2F2O95006 317 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 IGHV1-8P0DP01 117 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 PIPP12273 146 aaPredicted RBP7.2□□□□□ -1.26
SSBP1-212ENST00000489378 GLRA1P23415 457 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 CRABP1P29762 137 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 OTX1P32242 354 aaPredicted RBP7.2□□□□□ -1.26
SSBP1-212ENST00000489378 RPS27P42677 84 aaKnown RBP7.2□□□□□ -1.26
SSBP1-212ENST00000489378 PRKXP51817 358 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 SLC18A1P54219 525 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 ST3GAL3Q11203 375 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 AGBL2Q5U5Z8 902 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 GPR139Q6DWJ6 353 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 PLBD1Q6P4A8 553 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 TBPL2Q6SJ96 375 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 DRAM2Q6UX65 266 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 TMPRSS11FQ6ZWK6 438 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 CCDC80Q76M96 950 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 SLC16A9Q7RTY1 509 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 CPLX4Q7Z7G2 160 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 DHDDSQ86SQ9 333 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 ADCK1Q86TW2 530 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 CD177Q8N6Q3 437 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 OR2T27Q8NH04 317 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 RASSF5Q8WWW0 418 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 MICU1Q9BPX6 476 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 PAPOLGQ9BWT3 736 aaKnown RBP7.2□□□□□ -1.26
SSBP1-212ENST00000489378 NRIP3Q9NQ35 241 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 CCDC167Q9P0B6 97 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 IER3IP1Q9Y5U9 82 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 DSCAML1Q8TD84 2053 aa7.2□□□□□ -1.26
SSBP1-212ENST00000489378 PRR23D1E9PI22 279 aaPredicted RBP7.19□□□□□ -1.26
SSBP1-212ENST00000489378 H3BUI4 141 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 SNNO75324 88 aaPredicted RBP7.19□□□□□ -1.26
SSBP1-212ENST00000489378 PRR23D2P0DMB1 279 aaPredicted RBP7.19□□□□□ -1.26
SSBP1-212ENST00000489378 PSKH1P11801 424 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 DCTDP32321 178 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 YAP1P46937 504 aaKnown RBP7.19□□□□□ -1.26
SSBP1-212ENST00000489378 STX1BP61266 288 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 KLHL12Q53G59 568 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 MINOS1Q5TGZ0 78 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 DNM1P34Q6PK57 102 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 THAP5Q7Z6K1 395 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 OR4Q3Q8NH05 313 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 NDNFQ8TB73 568 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 LINC00476Q8WZB0 136 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 PRRC1Q96M27 445 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 RBM14Q96PK6 669 aaKnown RBP7.19□□□□□ -1.26
SSBP1-212ENST00000489378 CDRT15Q96T59 188 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 RTL8AQ9BWD3 113 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 OPA3Q9H6K4 179 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 KAT8Q9H7Z6 458 aaKnown RBP7.19□□□□□ -1.26
SSBP1-212ENST00000489378 TBC1D23Q9NUY8 699 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 MRPL22Q9NWU5 206 aaKnown RBP7.19□□□□□ -1.26
SSBP1-212ENST00000489378 LINC00527Q9UJ94 153 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 BAG5Q9UL15 447 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 MINOS1-NBL1R4GNA1 71 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 TNCP24821 2201 aa7.19□□□□□ -1.26
SSBP1-212ENST00000489378 A0A087WUU8 490 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 LDLRAD4O15165 306 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 TBX1O43435 398 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 XRCC2O43543 280 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 PTP4A3O75365 173 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 ZNF823P16415 610 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 MRPL19P49406 292 aaKnown RBP7.18□□□□□ -1.26
SSBP1-212ENST00000489378 GZMMP51124 257 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 IFFO1Q0D2I5 559 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 VMACQ2NL98 169 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 SLC36A3Q495N2 470 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 LCN8Q6JVE9 175 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 LCNL1Q6ZST4 164 aa7.18□□□□□ -1.26
SSBP1-212ENST00000489378 KCTD8Q6ZWB6 473 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms