RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 PIGLQ9Y2B2 252 aa18.56■□□□□ 0.56
PTPN4-211ENST00000488279 OR5B21A6NL26 309 aa18.55■□□□□ 0.56
PTPN4-211ENST00000488279 RNASEK-C17orf49H0YIS7 233 aa18.55■□□□□ 0.56
PTPN4-211ENST00000488279 MTRF1O75570 445 aaKnown RBP18.55■□□□□ 0.56
PTPN4-211ENST00000488279 ACTR3P61158 418 aa18.55■□□□□ 0.56
PTPN4-211ENST00000488279 SRSF4Q08170 494 aaKnown RBP18.55■□□□□ 0.56
PTPN4-211ENST00000488279 BLMHQ13867 455 aa18.55■□□□□ 0.56
PTPN4-211ENST00000488279 GDPGP1Q6ZNW5 385 aa18.55■□□□□ 0.56
PTPN4-211ENST00000488279 MEPCEQ7L2J0 689 aaKnown RBP18.55■□□□□ 0.56
PTPN4-211ENST00000488279 NUFIP1Q9UHK0 495 aaKnown RBP18.55■□□□□ 0.56
PTPN4-211ENST00000488279 ENPP5Q9UJA9 477 aa18.55■□□□□ 0.56
PTPN4-211ENST00000488279 COPS3Q9UNS2 423 aa18.55■□□□□ 0.56
PTPN4-211ENST00000488279 A0A1W2PQ09 198 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 PRR32B1ATL7 298 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 M0R1W7 72 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 NPFFO15130 113 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 IGLV3-1P01715 115 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 PSG2P11465 335 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 PRB3Q04118 309 aaPredicted RBP18.54■□□□□ 0.56
PTPN4-211ENST00000488279 DMRTC1Q5HYR2 192 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 PLCXD3Q63HM9 321 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 NCR3LG1Q68D85 454 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 HAGHLQ6PII5 290 aaPredicted RBP18.54■□□□□ 0.56
PTPN4-211ENST00000488279 AQP3Q92482 292 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 PPP1R14AQ96A00 147 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 MNTQ99583 582 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 CADM1Q9BY67 442 aaKnown RBP18.54■□□□□ 0.56
PTPN4-211ENST00000488279 TTTY10Q9BZA0 68 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 METTL8Q9H825 291 aaKnown RBP18.54■□□□□ 0.56
PTPN4-211ENST00000488279 KRT84Q9NSB2 600 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 RASL12Q9NYN1 266 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 RNF114Q9Y508 228 aa18.54■□□□□ 0.56
PTPN4-211ENST00000488279 IGKV1D-17A0A075B6S4 117 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 BTBD17A6NE02 478 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 SLC22A31A6NKX4 558 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 G3V2T6 193 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 DHRS3O75911 302 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 NRASP01111 189 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 FAHP16930 419 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 DLX1P56177 255 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 CXCR4P61073 352 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 ZNF684Q5T5D7 378 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 BRICD5Q6PL45 260 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 ZNF322Q6U7Q0 402 aaPredicted RBP18.53■□□□□ 0.56
PTPN4-211ENST00000488279 BCDIN3DQ7Z5W3 292 aaKnown RBP18.53■□□□□ 0.56
PTPN4-211ENST00000488279 TCEANCQ8N8B7 351 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 ZNRF1Q8ND25 227 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 TNFRSF14Q92956 283 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 DUS3LQ96G46 650 aaKnown RBP18.53■□□□□ 0.56
PTPN4-211ENST00000488279 SEMA6AQ9H2E6 1030 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 GTF2A1LQ9UNN4 478 aa18.53■□□□□ 0.56
PTPN4-211ENST00000488279 A0A1W2PRD5 423 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 A0A1W2PRF3 423 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 A0A1W2PRM7 423 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 MEIOCA2RUB1 952 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 LOC110117498-PIK3R3F6TDL0 507 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 PAHP00439 452 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 UBE2E1P51965 193 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 EFNB1P98172 346 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 MFGE8Q08431 387 aaPredicted RBP18.52■□□□□ 0.56
PTPN4-211ENST00000488279 KLRD1Q13241 179 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 ATP6AP1Q15904 470 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 NXNL2Q5VZ03 156 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 SLC35F2Q8IXU6 374 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 TMEM185AQ8NFB2 350 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 LINC01006Q8NI28 216 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 TMEM163Q8TC26 289 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 SDSLQ96GA7 329 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 CITED1Q99966 193 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 APOL4Q9BPW4 351 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 MOB1AQ9H8S9 216 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 ZNRD1Q9P1U0 126 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 ZNF222Q9UK12 451 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 MAB21L2Q9Y586 359 aa18.52■□□□□ 0.56
PTPN4-211ENST00000488279 TRBV23-1A0A0A0MS06 115 aa18.51■□□□□ 0.55
PTPN4-211ENST00000488279 MITFO75030 526 aaPredicted RBP18.51■□□□□ 0.55
PTPN4-211ENST00000488279 TTRP02766 147 aa18.51■□□□□ 0.55
PTPN4-211ENST00000488279 ACSM1Q08AH1 577 aa18.51■□□□□ 0.55
PTPN4-211ENST00000488279 TAF9Q16594 264 aa18.51■□□□□ 0.55
PTPN4-211ENST00000488279 BCL2L15Q5TBC7 163 aa18.51■□□□□ 0.55
PTPN4-211ENST00000488279 AADACL4Q5VUY2 407 aa18.51■□□□□ 0.55
PTPN4-211ENST00000488279 SLX4IPQ5VYV7 408 aa18.51■□□□□ 0.55
PTPN4-211ENST00000488279 ZNF573Q86YE8 665 aa18.51■□□□□ 0.55
PTPN4-211ENST00000488279 ZSCAN4Q8NAM6 433 aaPredicted RBP18.51■□□□□ 0.55
PTPN4-211ENST00000488279 ADGRL4Q9HBW9 690 aa18.51■□□□□ 0.55
PTPN4-211ENST00000488279 OR52A1Q9UKL2 312 aa18.51■□□□□ 0.55
PTPN4-211ENST00000488279 R4GMQ9 66 aa18.51■□□□□ 0.55
PTPN4-211ENST00000488279 ZAR1LA6NP61 321 aa18.5■□□□□ 0.55
PTPN4-211ENST00000488279 ZNF670-ZNF695F2Z2N8 137 aa18.5■□□□□ 0.55
PTPN4-211ENST00000488279 H0YAE9 185 aa18.5■□□□□ 0.55
PTPN4-211ENST00000488279 KCNAB3O43448 404 aa18.5■□□□□ 0.55
PTPN4-211ENST00000488279 SRSF10O75494 262 aaKnown RBP18.5■□□□□ 0.55
PTPN4-211ENST00000488279 EPHA2P29317 976 aa18.5■□□□□ 0.55
PTPN4-211ENST00000488279 SAA4P35542 130 aa18.5■□□□□ 0.55
PTPN4-211ENST00000488279 CAPZA1P52907 286 aa18.5■□□□□ 0.55
PTPN4-211ENST00000488279 EGR3Q06889 387 aa18.5■□□□□ 0.55
PTPN4-211ENST00000488279 SMIM21Q3B7S5 101 aa18.5■□□□□ 0.55
PTPN4-211ENST00000488279 CLVS2Q5SYC1 327 aa18.5■□□□□ 0.55
PTPN4-211ENST00000488279 ACP7Q6ZNF0 438 aa18.5■□□□□ 0.55
PTPN4-211ENST00000488279 ZDHHC13Q8IUH4 622 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms