RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ING4Q9UNL4 249 aa8.11□□□□□ -1.11
SF3B1-211ENST00000487698 CADP27708 2225 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 A0A0B4J293 547 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 IGKV1-12A0A0C4DH73 117 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 TMEM8BA6NDV4 472 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 TMEM235A6NFC5 223 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 CENPXA8MT69 81 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 SPRY1O43609 319 aaPredicted RBP8.1□□□□□ -1.11
SF3B1-211ENST00000487698 PFDN1O60925 122 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 RBBP9O75884 186 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 IGKV1D-12P01611 117 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 MT-ND4P03905 459 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 TMEM225BP0DP42 221 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 RAC2P15153 192 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 SERPINA2P20848 420 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 CCKARP32238 428 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 ERVS71-1P61550 626 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 PDZK1IP1Q13113 114 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 C3orf36Q3SXR2 165 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 TMEM255AQ5JRV8 349 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 PLAC9Q5JTB6 97 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 PLET1Q6UQ28 207 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 RTN4RL2Q86UN3 420 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 CALHM1Q8IU99 346 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 RELL2Q8NC24 303 aaPredicted RBP8.1□□□□□ -1.11
SF3B1-211ENST00000487698 OR56B1Q8NGI3 324 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 OR10K1Q8NGX5 313 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 DMRTA2Q96SC8 542 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 S100A13Q99584 98 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 MARVELD1Q9BSK0 173 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 URM1Q9BTM9 101 aaKnown RBP8.1□□□□□ -1.11
SF3B1-211ENST00000487698 OR2J1Q9GZK6 312 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 ZMAT3Q9HA38 289 aaKnown RBP8.1□□□□□ -1.11
SF3B1-211ENST00000487698 HRASLSQ9HDD0 168 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 MPC1Q9Y5U8 109 aa8.1□□□□□ -1.11
SF3B1-211ENST00000487698 IGHV2OR16-5A0A0B4J2B6 119 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 ANKRD30BLA7E2S9 258 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 EEF1E1-BLOC1S5C9J1V9 151 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 SOCS1O15524 211 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 ANGPTL7O43827 346 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 CSF1P09603 554 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 GSTT2BP0CG30 244 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 TUBG1P23258 451 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 TMEM50BP56557 158 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 SNTB2Q13425 540 aaKnown RBP8.09□□□□□ -1.11
SF3B1-211ENST00000487698 OR2T2Q6IF00 324 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 SEZ6L2Q6UXD5 910 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 Q6ZTK2 550 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 LIX1LQ8IVB5 337 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 ZSCAN4Q8NAM6 433 aaPredicted RBP8.09□□□□□ -1.11
SF3B1-211ENST00000487698 KDF1Q8NAX2 398 aaPredicted RBP8.09□□□□□ -1.11
SF3B1-211ENST00000487698 BHLHE23Q8NDY6 225 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 STEAP2Q8NFT2 490 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 OR1J1Q8NGS3 322 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 SLC25A40Q8TBP6 338 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 OR5P3Q8WZ94 311 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 CREB3L1Q96BA8 519 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 MARS2Q96GW9 593 aaKnown RBP8.09□□□□□ -1.11
SF3B1-211ENST00000487698 CCDC120Q96HB5 630 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 Q96M66 194 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 VKORC1Q9BQB6 163 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 SELENOIQ9C0D9 397 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 METTL9Q9H1A3 318 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.09□□□□□ -1.11
SF3B1-211ENST00000487698 TUBG2Q9NRH3 451 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 TAS2R8Q9NYW2 309 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 MRPL15Q9P015 296 aaKnown RBP8.09□□□□□ -1.11
SF3B1-211ENST00000487698 SH3BGRL2Q9UJC5 107 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 KCNK7Q9Y2U2 307 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 TPRP12270 2363 aaKnown RBP8.09□□□□□ -1.11
SF3B1-211ENST00000487698 NAP1L6A6NFF2 107 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 IQCF6A8MYZ5 107 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 MFNGO00587 321 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 ZNF780AO75290 641 aaPredicted RBP8.09□□□□□ -1.11
SF3B1-211ENST00000487698 GSTP1P09211 210 aaKnown RBP8.09□□□□□ -1.11
SF3B1-211ENST00000487698 HIST1H1DP16402 221 aaKnown RBP8.09□□□□□ -1.11
SF3B1-211ENST00000487698 CPT2P23786 658 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 CALCRP30988 508 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 ACTBP60709 375 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 ACTG1P63261 375 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 RSU1Q15404 277 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 PCGF3Q3KNV8 242 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 CDNFQ49AH0 187 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 ZNF611Q8N823 705 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 ST6GALNAC3Q8NDV1 305 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 Q8NFD4 153 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 OR5A2Q8NGI9 324 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 CHAC2Q8WUX2 184 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 DVL3Q92997 716 aaPredicted RBP8.09□□□□□ -1.11
SF3B1-211ENST00000487698 RAB3CQ96E17 227 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 NEURL2Q9BR09 285 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 ACTR6Q9GZN1 396 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 DPAGT1Q9H3H5 408 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 ELOVL5Q9NYP7 299 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 NPAP1Q9NZP6 1156 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 COPZ2Q9P299 210 aa8.09□□□□□ -1.11
SF3B1-211ENST00000487698 ZNF107Q9UII5 783 aaPredicted RBP8.09□□□□□ -1.11
SF3B1-211ENST00000487698 MEIS3P1A6NDR6 274 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 SSX5O60225 188 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 PLATP00750 562 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms