RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 TMEM246Q9BRR3 403 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 BARHL1Q9BZE3 327 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 MMP27Q9H306 513 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 TMBIM4Q9HC24 238 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 POLE4Q9NR33 117 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 PDP1Q9P0J1 537 aaPredicted RBP3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 ATPIF1Q9UII2 106 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 STARD10Q9Y365 291 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 SH3GLB1Q9Y371 365 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 SOX21Q9Y651 276 aaPredicted RBP3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 POMT1Q9Y6A1 747 aa3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 V9GYY5 206 aaPredicted RBP3.25□□□□□ -1.89
SNRNP40-205ENST00000486941 TET2Q6N021 2002 aaPredicted RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 IGHV3OR16-10A0A075B7F0 116 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 TRAV40A0A0B4J280 105 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 MDFIC2A0A1B0GVS7 189 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 A0A1B0GWJ7 208 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 OR6C6A6NF89 314 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 LRRC30A6NM36 301 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 PHYHO14832 338 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 DOK2O60496 412 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 CLPXO76031 633 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 CYB5R3P00387 301 aaPredicted RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 NPPAP01160 153 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 LIPFP07098 398 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 CD14P08571 375 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 IFI30P13284 250 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 SELEP16581 610 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 CHATP28329 748 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 IFNA8P32881 189 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 RBMXP38159 391 aaKnown RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 HTR5AP47898 357 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 PITPNBP48739 271 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 SLC9A3P48764 834 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 NPY4RP50391 375 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 SEC61BP60468 96 aaKnown RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 FGF12P61328 243 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 ISL1P61371 349 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 LSM6P62312 80 aaKnown RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 GNB1P62873 340 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 PRKCDQ05655 676 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 AQP6Q13520 282 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 BLMHQ13867 455 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 CYLC2Q14093 348 aaPredicted RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 ZNF404Q494X3 552 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 ZNF876PQ49A33 203 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 TTMPQ5BVD1 217 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 GPR157Q5UAW9 335 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 METTL21CQ5VZV1 264 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 WDR25Q64LD2 544 aaPredicted RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 ASPHD2Q6ICH7 369 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 NANOGP8Q6NSW7 305 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 ERICH5Q6P6B1 374 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 FIP1L1Q6UN15 594 aaKnown RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 BRD3OSQ6XYD6 125 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 ZNF841Q6ZN19 808 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 ZNF620Q6ZNG0 422 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 OAFQ86UD1 273 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 MOGAT3Q86VF5 341 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 CALHM3Q86XJ0 350 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 RNF113BQ8IZP6 322 aaKnown RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 OR8J3Q8NGG0 315 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 OR8B3Q8NGG8 313 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 OR51A7Q8NH64 312 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 OR1F12Q8NHA8 337 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 ZNF420Q8TAQ5 688 aaPredicted RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 SSMEM1Q8WWF3 244 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 DYRK2Q92630 601 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 APOBEC3DQ96AK3 386 aaPredicted RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 RASD2Q96D21 266 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 PRRC1Q96M27 445 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 ZNF583Q96ND8 569 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 ZNF582Q96NG8 517 aaPredicted RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 OR8B2Q96RD0 313 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 CCT8L2Q96SF2 557 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 RBM4BQ9BQ04 359 aaKnown RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 ECSITQ9BQ95 431 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 SLC30A2Q9BRI3 323 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 NUDT16L1Q9BRJ7 211 aaKnown RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 CHIAQ9BZP6 476 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 TMEM100Q9NV29 134 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 KIF17Q9P2E2 1029 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 CLN8Q9UBY8 286 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 A4GNTQ9UNA3 340 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 OR2W1Q9Y3N9 320 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 CMYA5Q8N3K9 4069 aa3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 PRKDCP78527 4128 aaKnown RBP3.24□□□□□ -1.89
SNRNP40-205ENST00000486941 TRAV27A0A087WT01 109 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 TEX13CA0A0J9YWL9 993 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 CENPVL3A0A0U1RRI6 287 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 PRSS37A4D1T9 235 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 IQCF6A8MYZ5 107 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 EFCAB9A8MZ26 197 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 ZNF879B4DU55 563 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 F5H5P2 479 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 H0YL77 283 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 FBP2O00757 339 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 XKRYO14609 159 aa3.23□□□□□ -1.89
SNRNP40-205ENST00000486941 MLNRO43193 412 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms