RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 RPL15P61313 204 aaKnown RBP5.82□□□□□ -1.48
HDAC3-209ENST00000486618 KRR1Q13601 381 aaKnown RBP5.82□□□□□ -1.48
HDAC3-209ENST00000486618 PTGES3Q15185 160 aaKnown RBP5.82□□□□□ -1.48
HDAC3-209ENST00000486618 AGKQ53H12 422 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 ARMCX4Q5H9R4 360 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 GCSAMLQ5JQS6 135 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 CXorf66Q5JRM2 361 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-209ENST00000486618 SPIN3Q5JUX0 258 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 IDNKQ5T6J7 187 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 SLX4IPQ5VYV7 408 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 FBXW9Q5XUX1 488 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 Q6ZNX1 250 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 GDPD3Q7L5L3 318 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 STHQ8IWL8 128 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 TMEM123Q8N131 208 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 SYS1Q8N2H4 156 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 CDRT4Q8N9R6 151 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 OR52N5Q8NH56 324 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 ZFP90Q8TF47 636 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 APH1BQ8WW43 257 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 PIK3R3Q92569 461 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 GCDHQ92947 438 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-209ENST00000486618 MCHR2Q969V1 340 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 ORAI1Q96D31 301 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 MS4A10Q96PG2 267 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 STACQ99469 402 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 HOPXQ9BPY8 73 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-209ENST00000486618 MRPL57Q9BQC6 102 aaKnown RBP5.82□□□□□ -1.48
HDAC3-209ENST00000486618 MAP1LC3CQ9BXW4 147 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 KRTAP4-5Q9BYR2 181 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 CSTL1Q9H114 145 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 EGLN3Q9H6Z9 239 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 PPP1R3EQ9H7J1 279 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 CXorf36Q9H7Y0 433 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 RHOFQ9HBH0 211 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 EQTNQ9NQ60 294 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 GSN-AS1Q9NRJ2 163 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 ZDHHC2Q9UIJ5 367 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF225Q9UK10 706 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 OR52A1Q9UKL2 312 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 SLC25A15Q9Y619 301 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 TENM1Q9UKZ4 2725 aa5.82□□□□□ -1.48
HDAC3-209ENST00000486618 TGP01266 2768 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 A0A087X0K7 114 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 RAD51CO43502 376 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 EFNA2O43921 213 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 OR7A10O76100 309 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 VENTXO95231 258 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 GTF2F2P13984 249 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 NCK1P16333 377 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF182P17025 639 aaPredicted RBP5.81□□□□□ -1.48
HDAC3-209ENST00000486618 SHC1P29353 583 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 CFHR2P36980 270 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 P2RX1P51575 399 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 CHN2P52757 468 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 NAA20P61599 178 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 SNRPD2P62316 118 aaKnown RBP5.81□□□□□ -1.48
HDAC3-209ENST00000486618 RAE1P78406 368 aaKnown RBP5.81□□□□□ -1.48
HDAC3-209ENST00000486618 AESQ08117 197 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF763Q0D2J5 394 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 FOXF1Q12946 379 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 SELENBP1Q13228 472 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 RAB31Q13636 194 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 POU2AF1Q16633 256 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 TEPPQ6URK8 271 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 ACOT7LQ6ZUV0 252 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 SLC16A14Q7RTX9 510 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 NRARPQ7Z6K4 114 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 ARHGAP24Q8N264 748 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 PARP8Q8N3A8 854 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 ATP6V1C2Q8NEY4 427 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 SEMA6DQ8NFY4 1073 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 ZFP28Q8NHY6 868 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 PHOSPHO1Q8TCT1 267 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 ZNF418Q8TF45 676 aaPredicted RBP5.81□□□□□ -1.48
HDAC3-209ENST00000486618 APH1AQ96BI3 265 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 OTULINQ96BN8 352 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 CMTM5Q96DZ9 223 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 SMIM12Q96EX1 92 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 TMEM80Q96HE8 168 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 AMDHD1Q96NU7 426 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 SORCS2Q96PQ0 1159 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 OR14A2Q96R54 314 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 FEVQ99581 238 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 TMEM109Q9BVC6 243 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 IFT27Q9BW83 186 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 MRPS26Q9BYN8 205 aaKnown RBP5.81□□□□□ -1.48
HDAC3-209ENST00000486618 BPESC1Q9GZL8 116 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 GLIPR2Q9H4G4 154 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 SLA2Q9H6Q3 261 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 SLC2A9Q9NRM0 540 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 ASB6Q9NWX5 421 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 COA4Q9NYJ1 87 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 TAS2R16Q9NYV7 291 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 ING1Q9UK53 422 aaPredicted RBP5.81□□□□□ -1.48
HDAC3-209ENST00000486618 AMDHD2Q9Y303 409 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 GOLT1BQ9Y3E0 138 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 ALG5Q9Y673 324 aa5.81□□□□□ -1.48
HDAC3-209ENST00000486618 WNK2Q9Y3S1 2297 aa5.8□□□□□ -1.48
HDAC3-209ENST00000486618 NUP214P35658 2090 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms