RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ZNF671Q8TAW3 534 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 PPP1R14AQ96A00 147 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 RNFT2Q96EX2 444 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 MRPL48Q96GC5 212 aaKnown RBP10.68□□□□□ -0.7
CHMP3-208ENST00000486404 HRASLS5Q96KN8 279 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 WDFY2Q96P53 400 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 DUX5Q96PT3 197 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 DNTTIP1Q9H147 329 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 OR51I2Q9H344 312 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 S100A14Q9HCY8 104 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 ESM1Q9NQ30 184 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 ACOXLQ9NUZ1 547 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 DUX4Q9UBX2 424 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 RPUSD1Q9UJJ7 312 aaKnown RBP10.68□□□□□ -0.7
CHMP3-208ENST00000486404 SLC22A13Q9Y226 551 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 POLDIP2Q9Y2S7 368 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 V9GYS6 101 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 LOC107986453A0A1B0GWG9 222 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 A0A1W2PQ09 198 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 DAPL1A0PJW8 107 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 ANKRD61A6NGH8 418 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 H3BSH0 61 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 J3QT63 122 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 DLGAP1O14490 977 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 TNFRSF13BO14836 293 aaPredicted RBP10.67□□□□□ -0.7
CHMP3-208ENST00000486404 ENTPD6O75354 484 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 RHBDL1O75783 438 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 GATBO75879 557 aaKnown RBP10.67□□□□□ -0.7
CHMP3-208ENST00000486404 UBCP0CG48 685 aaKnown RBP10.67□□□□□ -0.7
CHMP3-208ENST00000486404 NDUFB7P17568 137 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 HAAOP46952 286 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 GABRA2P47869 451 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 CAPZA1P52907 286 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 SNRPGP62308 76 aaKnown RBP10.67□□□□□ -0.7
CHMP3-208ENST00000486404 ELF3P78545 371 aaPredicted RBP10.67□□□□□ -0.7
CHMP3-208ENST00000486404 PDCD1Q15116 288 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 TP53I3Q53FA7 332 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 FAM76BQ5HYJ3 339 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 C9orf139Q6ZV77 190 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 ZNF573Q86YE8 665 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 PQLC1Q8N2U9 271 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 ZDHHC22Q8N966 263 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 TMEM185AQ8NFB2 350 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 GATAD2BQ8WXI9 593 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 AQP3Q92482 292 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 SLC25A28Q96A46 364 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 MED30Q96HR3 178 aa10.67□□□□□ -0.7
CHMP3-208ENST00000486404 SLC25A10Q9UBX3 287 aaPredicted RBP10.67□□□□□ -0.7
CHMP3-208ENST00000486404 A6NIN4 97 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 OR2AT4A6NND4 320 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 BAG2O95816 211 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 CCL1P22362 96 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 PRTN3P24158 256 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 BPIFB3P59826 476 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 ARF6P62330 175 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 ACTA2P62736 377 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 ACTG2P63267 376 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 ZSCAN26Q16670 478 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 RUSC1-AS1Q66K80 236 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 ZBTB49Q6ZSB9 765 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 KRT74Q7RTS7 529 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 FGFRL1Q8N441 504 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 CCDC54Q8NEL0 328 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 OR14K1Q8NGZ2 314 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 TRMT10AQ8TBZ6 339 aaKnown RBP10.66□□□□□ -0.7
CHMP3-208ENST00000486404 NPRL2Q8WTW4 380 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 RORBQ92753 470 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 LHX4Q969G2 390 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 ZNF48Q96MX3 618 aaPredicted RBP10.66□□□□□ -0.7
CHMP3-208ENST00000486404 GAFA1Q96PS6 74 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 TBX15Q96SF7 602 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 MBOAT4Q96T53 435 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 MYCBPQ99417 103 aaPredicted RBP10.66□□□□□ -0.7
CHMP3-208ENST00000486404 SIRPDQ9H106 197 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 SLC7A11Q9UPY5 501 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 PCDHGB1Q9Y5G3 927 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 KPTNQ9Y664 436 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 FBN3Q75N90 2809 aa10.66□□□□□ -0.7
CHMP3-208ENST00000486404 A0A1B0GTI1 187 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 MDFIC2A0A1B0GVS7 189 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 FAM230AA0A1W2PPH8 454 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 PQLC2LA1A4F0 135 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 SLC1A7O00341 560 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 SIGLEC5O15389 551 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 MPZL2O60487 215 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 NXPH2O95156 264 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 TFF1P04155 84 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 SELLP14151 372 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 MMP9P14780 707 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 ZNF85Q03923 595 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 ZNF91Q05481 1191 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 CNN3Q15417 329 aaKnown RBP10.65□□□□□ -0.7
CHMP3-208ENST00000486404 OCLNQ16625 522 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 CDONQ4KMG0 1287 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 SLC25A30Q5SVS4 291 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 ATPAF1Q5TC12 328 aaPredicted RBP10.65□□□□□ -0.7
CHMP3-208ENST00000486404 TMEM42Q69YG0 159 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 ZNF788Q6ZQV5 615 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 VMO1Q7Z5L0 202 aa10.65□□□□□ -0.7
CHMP3-208ENST00000486404 KIR3DL3Q8N743 410 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms