RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 BAG2O95816 211 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 PLATP00750 562 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 IGLV3-1P01715 115 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 NDUFB7P17568 137 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 AMY2BP19961 511 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 PRTN3P24158 256 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 ALDH3A2P51648 485 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 DEFB112Q30KQ8 113 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 TP53I3Q53FA7 332 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 CLVS2Q5SYC1 327 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 STUMQ69YW2 141 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 C10orf67Q8IYJ2 551 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 OR14K1Q8NGZ2 314 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 TRMT10AQ8TBZ6 339 aaKnown RBP14.6□□□□□ -0.07
COL6A1-204ENST00000486023 NPRL2Q8WTW4 380 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 TAF15Q92804 592 aaKnown RBP eCLIP14.6□□□□□ -0.07
COL6A1-204ENST00000486023 C12orf43Q96C57 262 aaKnown RBP14.6□□□□□ -0.07
COL6A1-204ENST00000486023 RNFT2Q96EX2 444 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 TBX15Q96SF7 602 aa14.6□□□□□ -0.07
COL6A1-204ENST00000486023 RPUSD1Q9UJJ7 312 aaKnown RBP14.6□□□□□ -0.07
COL6A1-204ENST00000486023 A0A1B0GTI1 187 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 FAM230AA0A1W2PPH8 454 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 TMEM89A2RUT3 159 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 OR5B21A6NL26 309 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 OR2AT4A6NND4 320 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 SYT7O43581 403 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 SYNGR1O43759 233 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 INMTO95050 263 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 HAAOP46952 286 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 CAPZA1P52907 286 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 FAM220AQ7Z4H9 259 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 TRUB1Q8WWH5 349 aaKnown RBP14.59□□□□□ -0.07
COL6A1-204ENST00000486023 AQP3Q92482 292 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 RORBQ92753 470 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 SLC25A28Q96A46 364 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 PLEKHA1Q9HB21 404 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 S100A14Q9HCY8 104 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 USE1Q9NZ43 259 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 GMPPBQ9Y5P6 360 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 V9GYS6 101 aa14.59□□□□□ -0.07
COL6A1-204ENST00000486023 TENM1Q9UKZ4 2725 aa14.58□□□□□ -0.07
COL6A1-204ENST00000486023 CENPVL3A0A0U1RRI6 287 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 HOXA3O43365 443 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-204ENST00000486023 CFPP27918 469 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 TGM4P49221 684 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 IL13RA1P78552 427 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 SLC9A3R2Q15599 337 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 DGUOKQ16854 277 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 ZBTB37Q5TC79 503 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 VMO1Q7Z5L0 202 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 CATSPERDQ86XM0 798 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 RDH10Q8IZV5 341 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 TMEM185AQ8NFB2 350 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 ANGPTL6Q8NI99 470 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 GATAD2BQ8WXI9 593 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 MED30Q96HR3 178 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 C1orf147Q96MC9 270 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-204ENST00000486023 GAFA1Q96PS6 74 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 MBOAT4Q96T53 435 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 ELL3Q9HB65 397 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-204ENST00000486023 ACOXLQ9NUZ1 547 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 SLC25A10Q9UBX3 287 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-204ENST00000486023 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL6A1-204ENST00000486023 ANK2Q01484 3957 aa14.58□□□□□ -0.08
COL6A1-204ENST00000486023 A0A1W2PQ09 198 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 A0A1W2PRD5 423 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 A0A1W2PRF3 423 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 A0A1W2PRM7 423 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 DAPL1A0PJW8 107 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 PSG2P11465 335 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 MMP9P14780 707 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 DLX1P56177 255 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 ZNF85Q03923 595 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 TMED1Q13445 227 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 PDCD1Q15116 288 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 CDONQ4KMG0 1287 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 ATPAF1Q5TC12 328 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-204ENST00000486023 ZNF788Q6ZQV5 615 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 ZBTB49Q6ZSB9 765 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 ANGPTL5Q86XS5 388 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 ZNF573Q86YE8 665 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 ZNRF1Q8ND25 227 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 HRASLS5Q96KN8 279 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 SLC29A1Q99808 456 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 C9orf16Q9BUW7 83 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 SIRPDQ9H106 197 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 SIRT7Q9NRC8 400 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 SLC7A11Q9UPY5 501 aa14.57□□□□□ -0.08
COL6A1-204ENST00000486023 J3QLW9 94 aa14.56□□□□□ -0.08
COL6A1-204ENST00000486023 DLGAP1O14490 977 aa14.56□□□□□ -0.08
COL6A1-204ENST00000486023 SULT1C4O75897 302 aa14.56□□□□□ -0.08
COL6A1-204ENST00000486023 ACAA1P09110 424 aaPredicted RBP14.56□□□□□ -0.08
COL6A1-204ENST00000486023 ZNF19P17023 458 aa14.56□□□□□ -0.08
COL6A1-204ENST00000486023 C9orf139Q6ZV77 190 aa14.56□□□□□ -0.08
COL6A1-204ENST00000486023 CMTM4Q8IZR5 234 aa14.56□□□□□ -0.08
COL6A1-204ENST00000486023 PRSS35Q8N3Z0 413 aa14.56□□□□□ -0.08
COL6A1-204ENST00000486023 DCTN5Q9BTE1 182 aa14.56□□□□□ -0.08
COL6A1-204ENST00000486023 AMBNQ9NP70 447 aa14.56□□□□□ -0.08
COL6A1-204ENST00000486023 OR14J1Q9UGF5 321 aa14.56□□□□□ -0.08
COL6A1-204ENST00000486023 IGKV1D-17A0A075B6S4 117 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 243.6 ms