RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, human

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLXNB3-208	ENST00000485980	DCTD	P32321	178 aa		12.82	□□□□□ -0.36
PLXNB3-208	ENST00000485980	PROK1	P58294	105 aa		12.82	□□□□□ -0.36
PLXNB3-208	ENST00000485980	RPL15	P61313	204 aa	Known RBP	12.82	□□□□□ -0.36
PLXNB3-208	ENST00000485980	RAB40B	Q12829	278 aa		12.82	□□□□□ -0.36
PLXNB3-208	ENST00000485980	C2orf68	Q2NKX9	166 aa		12.82	□□□□□ -0.36
PLXNB3-208	ENST00000485980	CSNK2A3	Q8NEV1	391 aa		12.82	□□□□□ -0.36
PLXNB3-208	ENST00000485980	OR8S1	Q8NH09	359 aa		12.82	□□□□□ -0.36
PLXNB3-208	ENST00000485980	GGH	Q92820	318 aa		12.82	□□□□□ -0.36
PLXNB3-208	ENST00000485980	CNOT2	Q9NZN8	540 aa	Known RBP	12.82	□□□□□ -0.36
PLXNB3-208	ENST00000485980	MRPL15	Q9P015	296 aa	Known RBP	12.82	□□□□□ -0.36
PLXNB3-208	ENST00000485980	BLOC1S6	Q9UL45	172 aa		12.82	□□□□□ -0.36
PLXNB3-208	ENST00000485980	EXOG	Q9Y2C4	368 aa	Known RBP	12.82	□□□□□ -0.36
PLXNB3-208	ENST00000485980	KMT2C	Q8NEZ4	4911 aa	Known RBP	12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980		A0A1W2PQL4	384 aa	Predicted RBP	12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	DAPL1	A0PJW8	107 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	LRRC30	A6NM36	301 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	PTGES3L	E9PB15	166 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	FADS2	O95864	444 aa	Known RBP	12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	SFTPB	P07988	381 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	CSF1	P09603	554 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	IRF2	P14316	349 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	CA6	P23280	308 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	CRHBP	P24387	322 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	FAM201A	Q5SY85	155 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980		Q6ZPA2	131 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	PLEKHG7	Q6ZR37	379 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	OR8B12	Q8NGG6	310 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	OR52I1	Q8NGK6	324 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	GATAD2B	Q8WXI9	593 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	SPSB4	Q96A44	273 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	PAPOLG	Q9BWT3	736 aa	Known RBP	12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	PBOV1	Q9GZY1	135 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	FGF20	Q9NP95	211 aa	Predicted RBP	12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	GNG8	Q9UK08	70 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	MYRF	Q9Y2G1	1151 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980		R4GMQ9	66 aa		12.81	□□□□□ -0.36
PLXNB3-208	ENST00000485980	METTL15	A6NJ78	407 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980		F5H5P2	479 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	TNFRSF13B	O14836	293 aa	Predicted RBP	12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	GMDS	O60547	372 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	RPP14	O95059	124 aa	Known RBP	12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	IGHV4-59	P01825	116 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	HLA-DPB1	P04440	258 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	PIP	P12273	146 aa	Predicted RBP	12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	GSK3A	P49840	483 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	ACTA2	P62736	377 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	ACTG2	P63267	376 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	ST3GAL4	Q11206	333 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	FAM189A2	Q15884	450 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	BEAN1	Q3B7T3	259 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	ZNF404	Q494X3	552 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	WDR25	Q64LD2	544 aa	Predicted RBP	12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	LYPD2	Q6UXB3	125 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	AHSA2	Q719I0	299 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	MOGAT3	Q86VF5	341 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	STX19	Q8N4C7	294 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	SPERT	Q8NA61	448 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	OR11L1	Q8NGX0	322 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	MYDGF	Q969H8	173 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	SGK3	Q96BR1	496 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	MEGF10	Q96KG7	1140 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	DUSP21	Q9H596	190 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	ACOXL	Q9NUZ1	547 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	FKBP14	Q9NWM8	211 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	C14orf119	Q9NWQ9	140 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	FAM206A	Q9NX38	181 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	NUFIP1	Q9UHK0	495 aa	Known RBP	12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	SNX5	Q9Y5X3	404 aa		12.8	□□□□□ -0.36
PLXNB3-208	ENST00000485980	CENPVL3	A0A0U1RRI6	287 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	hCG_38984	A0A1B0GV85	526 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	C5orf63	A6NC05	138 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	ANXA2P2	A6NMY6	339 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980		H0YL77	283 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980		J3QRE1	110 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	P2RY10	O00398	339 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	MLNR	O43193	412 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	ENSA	O43768	121 aa	Known RBP	12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	SULT1C4	O75897	302 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	TOX4	O94842	621 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	EEF1B2	P24534	225 aa	Known RBP	12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	DCK	P27707	260 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	CFHR2	P36980	270 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	SLC35A2	P78381	396 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	FAM3A	P98173	230 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	PRSS45	Q7RTY3	260 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	C1orf87	Q8N0U7	546 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	ACBD7	Q8N6N7	88 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	TMEM80	Q96HE8	168 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	TECTB	Q96PL2	329 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	NR1H4	Q96RI1	486 aa	Predicted RBP	12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	ABCB9	Q9NP78	766 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	MRM2	Q9UI43	246 aa	Known RBP	12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	OR52A1	Q9UKL2	312 aa		12.79	□□□□□ -0.36
PLXNB3-208	ENST00000485980	TET2	Q6N021	2002 aa	Predicted RBP	12.78	□□□□□ -0.36
PLXNB3-208	ENST00000485980		A0A0U1RQV5	110 aa		12.78	□□□□□ -0.36
PLXNB3-208	ENST00000485980	PRR32	B1ATL7	298 aa		12.78	□□□□□ -0.36
PLXNB3-208	ENST00000485980	C22orf46	C9J442	243 aa		12.78	□□□□□ -0.36
PLXNB3-208	ENST00000485980	MAGEB4	O15481	346 aa	Predicted RBP	12.78	□□□□□ -0.36
PLXNB3-208	ENST00000485980	MTRF1	O75570	445 aa	Known RBP	12.78	□□□□□ -0.36
PLXNB3-208	ENST00000485980	TNFAIP8	O95379	198 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms