RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 ACAA1P09110 424 aaPredicted RBP17.66■□□□□ 0.42
USP40-215ENST00000484528 SAA4P35542 130 aa17.66■□□□□ 0.42
USP40-215ENST00000484528 DAPP51397 102 aa17.66■□□□□ 0.42
USP40-215ENST00000484528 CEACAM21Q3KPI0 293 aa17.66■□□□□ 0.42
USP40-215ENST00000484528 HAGHLQ6PII5 290 aaPredicted RBP17.66■□□□□ 0.42
USP40-215ENST00000484528 Q6ZSV7 163 aa17.66■□□□□ 0.42
USP40-215ENST00000484528 PAPD5Q8NDF8 572 aaKnown RBP17.66■□□□□ 0.42
USP40-215ENST00000484528 DUS3LQ96G46 650 aaKnown RBP17.66■□□□□ 0.42
USP40-215ENST00000484528 DMRTB1Q96MA1 342 aa17.66■□□□□ 0.42
USP40-215ENST00000484528 OR8B4Q96RC9 309 aa17.66■□□□□ 0.42
USP40-215ENST00000484528 ZNF222Q9UK12 451 aa17.66■□□□□ 0.42
USP40-215ENST00000484528 PIGLQ9Y2B2 252 aa17.66■□□□□ 0.42
USP40-215ENST00000484528 MEIOCA2RUB1 952 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 BTBD17A6NE02 478 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 MAGEB4O15481 346 aaPredicted RBP17.65■□□□□ 0.42
USP40-215ENST00000484528 PAHP00439 452 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 PSG2P11465 335 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 RIDAP52758 137 aaKnown RBP17.65■□□□□ 0.42
USP40-215ENST00000484528 RIPPLY1Q0D2K3 151 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 PTGES3Q15185 160 aaKnown RBP17.65■□□□□ 0.42
USP40-215ENST00000484528 FAHD1Q6P587 224 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 DEGS2Q6QHC5 323 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 GDPGP1Q6ZNW5 385 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 PLEKHG7Q6ZR37 379 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 ZNF679Q8IYX0 411 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 FAM185AQ8N0U4 392 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 LRTOMTQ8WZ04 291 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 AQP3Q92482 292 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 SLC7A6OSQ96CW6 309 aaPredicted RBP17.65■□□□□ 0.42
USP40-215ENST00000484528 ZNF488Q96MN9 340 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 CNN2Q99439 309 aaKnown RBP17.65■□□□□ 0.42
USP40-215ENST00000484528 VPREB3Q9UKI3 123 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 MAB21L2Q9Y586 359 aa17.65■□□□□ 0.42
USP40-215ENST00000484528 ACOD1A6NK06 481 aa17.64■□□□□ 0.41
USP40-215ENST00000484528 OR5B21A6NL26 309 aa17.64■□□□□ 0.41
USP40-215ENST00000484528 GSC2O15499 205 aa17.64■□□□□ 0.41
USP40-215ENST00000484528 MITFO75030 526 aaPredicted RBP17.64■□□□□ 0.41
USP40-215ENST00000484528 CAPZA1P52907 286 aa17.64■□□□□ 0.41
USP40-215ENST00000484528 CAV3P56539 151 aa17.64■□□□□ 0.41
USP40-215ENST00000484528 PROK1P58294 105 aa17.64■□□□□ 0.41
USP40-215ENST00000484528 ROM1Q03395 351 aa17.64■□□□□ 0.41
USP40-215ENST00000484528 ZNF829Q3KNS6 432 aaPredicted RBP17.64■□□□□ 0.41
USP40-215ENST00000484528 MIDNQ504T8 468 aa17.64■□□□□ 0.41
USP40-215ENST00000484528 DHRS7BQ6IAN0 325 aaPredicted RBP17.64■□□□□ 0.41
USP40-215ENST00000484528 NPRL2Q8WTW4 380 aa17.64■□□□□ 0.41
USP40-215ENST00000484528 DNAJC9Q8WXX5 260 aa17.64■□□□□ 0.41
USP40-215ENST00000484528 APOL4Q9BPW4 351 aa17.64■□□□□ 0.41
USP40-215ENST00000484528 NUFIP1Q9UHK0 495 aaKnown RBP17.64■□□□□ 0.41
USP40-215ENST00000484528 M0R1W7 72 aa17.63■□□□□ 0.41
USP40-215ENST00000484528 ZNF254O75437 659 aa17.63■□□□□ 0.41
USP40-215ENST00000484528 DNAJC8O75937 253 aaPredicted RBP17.63■□□□□ 0.41
USP40-215ENST00000484528 IGLV3-1P01715 115 aa17.63■□□□□ 0.41
USP40-215ENST00000484528 TTRP02766 147 aa17.63■□□□□ 0.41
USP40-215ENST00000484528 BATF2Q8N1L9 274 aa17.63■□□□□ 0.41
USP40-215ENST00000484528 ZSCAN4Q8NAM6 433 aaPredicted RBP17.63■□□□□ 0.41
USP40-215ENST00000484528 OR5A2Q8NGI9 324 aa17.63■□□□□ 0.41
USP40-215ENST00000484528 ZNF671Q8TAW3 534 aa17.63■□□□□ 0.41
USP40-215ENST00000484528 ASB17Q8WXJ9 295 aa17.63■□□□□ 0.41
USP40-215ENST00000484528 NRBF2Q96F24 287 aa17.63■□□□□ 0.41
USP40-215ENST00000484528 METTL8Q9H825 291 aaKnown RBP17.63■□□□□ 0.41
USP40-215ENST00000484528 GPR173Q9NS66 373 aa17.63■□□□□ 0.41
USP40-215ENST00000484528 ENPP5Q9UJA9 477 aa17.63■□□□□ 0.41
USP40-215ENST00000484528 TMEM14AQ9Y6G1 99 aa17.63■□□□□ 0.41
USP40-215ENST00000484528 LOC110117498-PIK3R3F6TDL0 507 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 H0YAE9 185 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 SYNGR1O43759 233 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 ATP6V1B1P15313 513 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 EPHA2P29317 976 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 CEBPDP49716 269 aaPredicted RBP17.62■□□□□ 0.41
USP40-215ENST00000484528 CXCR4P61073 352 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 BLMHQ13867 455 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 ZNF684Q5T5D7 378 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 NCR3LG1Q68D85 454 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 ZNF322Q6U7Q0 402 aaPredicted RBP17.62■□□□□ 0.41
USP40-215ENST00000484528 MEPCEQ7L2J0 689 aaKnown RBP17.62■□□□□ 0.41
USP40-215ENST00000484528 KRT74Q7RTS7 529 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 SLC35F2Q8IXU6 374 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 TCEANCQ8N8B7 351 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 BCAS4Q8TDM0 211 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 C17orf50Q8WW18 174 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 UTP4Q969X6 686 aaKnown RBP17.62■□□□□ 0.41
USP40-215ENST00000484528 C19orf12Q9NSK7 152 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 CMYA5Q8N3K9 4069 aa17.62■□□□□ 0.41
USP40-215ENST00000484528 A6NIN4 97 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 M0QZ24 198 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 ANGPTL7O43827 346 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 SRSF10O75494 262 aaKnown RBP17.61■□□□□ 0.41
USP40-215ENST00000484528 DHRS3O75911 302 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 CLPXO76031 633 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 NRASP01111 189 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 UBE2E1P51965 193 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 ESRRGP62508 458 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 BCL2L15Q5TBC7 163 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 ASPHD2Q6ICH7 369 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 HCP5Q6MZN7 132 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 ACP7Q6ZNF0 438 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 C1orf122Q6ZSJ8 110 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 CD177Q8N6Q3 437 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 OR5K1Q8NHB7 308 aa17.61■□□□□ 0.41
USP40-215ENST00000484528 SDSLQ96GA7 329 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms