RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 CDK5R1Q15078 307 aa13.27□□□□□ -0.29
UPF3A-208ENST00000484246 ODF4Q2M2E3 257 aa13.27□□□□□ -0.29
UPF3A-208ENST00000484246 CR1LQ2VPA4 569 aa13.27□□□□□ -0.29
UPF3A-208ENST00000484246 ESCO2Q56NI9 601 aa13.27□□□□□ -0.29
UPF3A-208ENST00000484246 C6orf141Q5SZD1 244 aa13.27□□□□□ -0.29
UPF3A-208ENST00000484246 RPL22L1Q6P5R6 122 aaKnown RBP13.27□□□□□ -0.29
UPF3A-208ENST00000484246 KCTD8Q6ZWB6 473 aa13.27□□□□□ -0.29
UPF3A-208ENST00000484246 FAM90A1Q86YD7 464 aa13.27□□□□□ -0.29
UPF3A-208ENST00000484246 ZNF573Q86YE8 665 aa13.27□□□□□ -0.29
UPF3A-208ENST00000484246 RDH10Q8IZV5 341 aa13.27□□□□□ -0.29
UPF3A-208ENST00000484246 DNAAF1Q8NEP3 725 aa13.27□□□□□ -0.29
UPF3A-208ENST00000484246 AQP3Q92482 292 aa13.27□□□□□ -0.29
UPF3A-208ENST00000484246 RPL3LQ92901 407 aaKnown RBP13.27□□□□□ -0.29
UPF3A-208ENST00000484246 METTL17Q9H7H0 456 aaPredicted RBP13.27□□□□□ -0.29
UPF3A-208ENST00000484246 GPR173Q9NS66 373 aa13.27□□□□□ -0.29
UPF3A-208ENST00000484246 CHCHD3Q9NX63 227 aaKnown RBP13.27□□□□□ -0.29
UPF3A-208ENST00000484246 KAAG1Q9UBP8 84 aa13.27□□□□□ -0.29
UPF3A-208ENST00000484246 A0A0G2JMP0 313 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 A0A0X1KG70 313 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 SLC1A7O00341 560 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 OGG1O15527 345 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 NOS1APO75052 506 aaPredicted RBP13.26□□□□□ -0.29
UPF3A-208ENST00000484246 DYSFO75923 2080 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 ACAA1P09110 424 aaPredicted RBP13.26□□□□□ -0.29
UPF3A-208ENST00000484246 NPY4RP50391 375 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 HOXA4Q00056 320 aaPredicted RBP13.26□□□□□ -0.29
UPF3A-208ENST00000484246 UBE2V2Q15819 145 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 C11orf91Q3C1V1 193 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 KRTAP21-3Q3LHN1 58 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 CHRFAM7AQ494W8 412 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 FAM120AOSQ5T036 256 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 OR2G6Q5TZ20 316 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 AHSA2Q719I0 299 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 ZNF676Q8N7Q3 588 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 BPIFB6Q8NFQ5 453 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 OR4M2Q8NGB6 313 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 OR8B3Q8NGG8 313 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 OR10AC1Q8NH08 325 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 DACT3Q96B18 629 aaPredicted RBP13.26□□□□□ -0.29
UPF3A-208ENST00000484246 SPSB1Q96BD6 273 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 ADAT3Q96EY9 351 aaPredicted RBP13.26□□□□□ -0.29
UPF3A-208ENST00000484246 OR8B2Q96RD0 313 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 SSBP3Q9BWW4 388 aaPredicted RBP13.26□□□□□ -0.29
UPF3A-208ENST00000484246 PKIBQ9C010 78 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 COMMD4Q9H0A8 199 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 DNTTIP1Q9H147 329 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 LPAR2Q9HBW0 351 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 BABAM2Q9NXR7 383 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 ERVK-18Q9QC07 812 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 CLEC2DQ9UHP7 191 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 POLDIP2Q9Y2S7 368 aa13.26□□□□□ -0.29
UPF3A-208ENST00000484246 ALX3O95076 343 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 SERPINA3P01011 423 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 MT-ND2P03891 347 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 HNF1AP20823 631 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 ZFP36P26651 326 aaKnown RBP13.25□□□□□ -0.29
UPF3A-208ENST00000484246 VHLP40337 213 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 PITPNBP48739 271 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 SEC61A1P61619 476 aaKnown RBP13.25□□□□□ -0.29
UPF3A-208ENST00000484246 PAX2Q02962 417 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 CNN3Q15417 329 aaKnown RBP13.25□□□□□ -0.29
UPF3A-208ENST00000484246 MICBQ29980 383 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 ATPAF1Q5TC12 328 aaPredicted RBP13.25□□□□□ -0.29
UPF3A-208ENST00000484246 STUMQ69YW2 141 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 XAF1Q6GPH4 301 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 HAGHLQ6PII5 290 aaPredicted RBP13.25□□□□□ -0.29
UPF3A-208ENST00000484246 ZNF841Q6ZN19 808 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 TEX29Q8N6K0 151 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 POC1AQ8NBT0 407 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 OR51A4Q8NGJ6 313 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 OR5AK2Q8NH90 309 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 ZNF671Q8TAW3 534 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 SMIM19Q96E16 107 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 SHARPINQ9H0F6 387 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 CTSZQ9UBR2 303 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 RAB26Q9ULW5 256 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 SLC7A11Q9UPY5 501 aa13.25□□□□□ -0.29
UPF3A-208ENST00000484246 RRP15Q9Y3B9 282 aaKnown RBP13.25□□□□□ -0.29
UPF3A-208ENST00000484246 YLPM1P49750 1951 aaKnown RBP13.25□□□□□ -0.29
UPF3A-208ENST00000484246 IGKV1-9A0A0C4DH69 117 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 TRBV2A0A0J9YWF9 115 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 RHBDL1O75783 438 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 CDK1P06493 297 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 FAM157CP0CG43 387 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 PGA5P0DJD9 388 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 C21orf33P30042 268 aaPredicted RBP13.24□□□□□ -0.29
UPF3A-208ENST00000484246 FUT6P51993 359 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 GTF2A1P52655 376 aaPredicted RBP13.24□□□□□ -0.29
UPF3A-208ENST00000484246 TAS2R43P59537 309 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 SLC35A2P78381 396 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 IL24Q13007 206 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 WDR25Q64LD2 544 aaPredicted RBP13.24□□□□□ -0.29
UPF3A-208ENST00000484246 DMKNQ6E0U4 476 aaPredicted RBP13.24□□□□□ -0.29
UPF3A-208ENST00000484246 SFRP4Q6FHJ7 346 aaPredicted RBP13.24□□□□□ -0.29
UPF3A-208ENST00000484246 STX19Q8N4C7 294 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 PARP16Q8N5Y8 322 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 BOLLQ8N9W6 283 aaKnown RBP13.24□□□□□ -0.29
UPF3A-208ENST00000484246 C19orf18Q8NEA5 215 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 DEFB108BQ8NET1 73 aa13.24□□□□□ -0.29
UPF3A-208ENST00000484246 RGP1Q92546 391 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms