RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 MRI1Q9BV20 369 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 ALG8Q9BVK2 526 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 TTTY10Q9BZA0 68 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 ZMAT3Q9HA38 289 aaKnown RBP8.34□□□□□ -1.07
CPSF4-213ENST00000484112 PLEKHA1Q9HB21 404 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 TMEM165Q9HC07 324 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 PLCXD1Q9NUJ7 323 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 ACOXLQ9NUZ1 547 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 ERVK13-1Q9NX77 482 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 DCAF16Q9NXF7 216 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 CNOT2Q9NZN8 540 aaKnown RBP8.34□□□□□ -1.07
CPSF4-213ENST00000484112 GTF2A1LQ9UNN4 478 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 DIMT1Q9UNQ2 313 aaKnown RBP8.34□□□□□ -1.07
CPSF4-213ENST00000484112 PIGLQ9Y2B2 252 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 WNK2Q9Y3S1 2297 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 EFCAB10A6NFE3 127 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 OOEPA6NGQ2 149 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 A6NLC8 198 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 LGALS8O00214 317 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 GATBO75879 557 aaKnown RBP8.33□□□□□ -1.08
CPSF4-213ENST00000484112 CYB5R3P00387 301 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-213ENST00000484112 SERPINA3P01011 423 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 NRASP01111 189 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 GRPP07492 148 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 RNASE1P07998 156 aaKnown RBP8.33□□□□□ -1.08
CPSF4-213ENST00000484112 HTR1AP08908 422 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 CCDC159P0C7I6 412 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 MYL12AP19105 171 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 MDKP21741 143 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-213ENST00000484112 PMELP40967 661 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 HSPA13P48723 471 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 TGM4P49221 684 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 SEC61A1P61619 476 aaKnown RBP8.33□□□□□ -1.08
CPSF4-213ENST00000484112 SLC9A3R2Q15599 337 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 MPPED2Q15777 294 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 TP53I3Q53FA7 332 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 WDR38Q5JTN6 314 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 PRAMEF6Q5VXH4 476 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 TEX36Q5VZQ5 186 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 TMPRSS11AQ6ZMR5 421 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 OR52I1Q8NGK6 324 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 OR2G2Q8NGZ5 317 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 PP6455Q8WZ26 134 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 RNF170Q96K19 258 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 C4orf36Q96KX1 117 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 ZNF649Q9BS31 505 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 DNTTIP1Q9H147 329 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 C1orf123Q9NWV4 160 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 CHCHD3Q9NX63 227 aaKnown RBP8.33□□□□□ -1.08
CPSF4-213ENST00000484112 MYRFQ9Y2G1 1151 aa8.33□□□□□ -1.08
CPSF4-213ENST00000484112 CAB39Q9Y376 341 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-213ENST00000484112 EXOSC1Q9Y3B2 195 aaKnown RBP8.33□□□□□ -1.08
CPSF4-213ENST00000484112 SOX21Q9Y651 276 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-213ENST00000484112 hCG_1807616A0A1W2PRN6 198 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 TMEM212A6NML5 194 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 CEACAM18A8MTB9 384 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 J3QLW9 94 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 P2RY10O00398 339 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 MAGEB4O15481 346 aaPredicted RBP8.32□□□□□ -1.08
CPSF4-213ENST00000484112 ACAA1P09110 424 aaPredicted RBP8.32□□□□□ -1.08
CPSF4-213ENST00000484112 WNT2P09544 360 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 ZNF19P17023 458 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 PSMB10P40306 273 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 GBX2P52951 348 aaPredicted RBP8.32□□□□□ -1.08
CPSF4-213ENST00000484112 OR12D2P58182 307 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 SRSF4Q08170 494 aaKnown RBP8.32□□□□□ -1.08
CPSF4-213ENST00000484112 ALKBH1Q13686 389 aaKnown RBP8.32□□□□□ -1.08
CPSF4-213ENST00000484112 MICBQ29980 383 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 ESCO2Q56NI9 601 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 WDR82Q6UXN9 313 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 LHFPL3Q86UP9 236 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 ZNF573Q86YE8 665 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 C11orf53Q8IXP5 236 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 PRSS35Q8N3Z0 413 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 GCSAMQ8N6F7 178 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 OR8B3Q8NGG8 313 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 ZNF671Q8TAW3 534 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 CNIH3Q8TBE1 160 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 HPSE2Q8WWQ2 592 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 RNF166Q96A37 237 aaPredicted RBP8.32□□□□□ -1.08
CPSF4-213ENST00000484112 TMIGD2Q96BF3 282 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 PELI1Q96FA3 418 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 NEIL1Q96FI4 390 aaPredicted RBP8.32□□□□□ -1.08
CPSF4-213ENST00000484112 TMEM80Q96HE8 168 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 DMRTB1Q96MA1 342 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 OR8B2Q96RD0 313 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 TMEM246Q9BRR3 403 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 CHST5Q9GZS9 411 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 SLITRK2Q9H156 845 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 OR51I2Q9H344 312 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 NEK6Q9HC98 313 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 AMBNQ9NP70 447 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 TNFRSF19Q9NS68 423 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 UFSP2Q9NUQ7 469 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 RASL12Q9NYN1 266 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 FRRS1LQ9P0K9 344 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 KAAG1Q9UBP8 84 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 NKX1-2Q9UD57 310 aaPredicted RBP8.32□□□□□ -1.08
CPSF4-213ENST00000484112 AASSQ9UDR5 926 aa8.32□□□□□ -1.08
CPSF4-213ENST00000484112 HHLA2Q9UM44 414 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms