RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 PRB1P04280 392 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 UBBP0CG47 229 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 TMEM225BP0DP42 221 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 PTHLHP12272 177 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 ZNF250P15622 560 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 PTAFRP25105 342 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 GPM6AP51674 278 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 TAS2R20P59543 309 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 PDZK1IP1Q13113 114 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 UNQ6126/PRO20091Q6UXV3 157 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 BAIAP2L2Q6UXY1 529 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 Q6ZR03 302 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 SSX8Q7RTT4 187 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 WDR86Q86TI4 376 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 RTN4RL2Q86UN3 420 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 C1orf174Q8IYL3 243 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 OR8H2Q8N162 312 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 Q8N402 240 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 PNLDC1Q8NA58 520 aaKnown RBP8.62□□□□□ -1.03
HDAC6-226ENST00000483656 OR8G5Q8NG78 346 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 OR10K1Q8NGX5 313 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 LINC01560Q8TB33 94 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 TMEM171Q8WVE6 324 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 GCDHQ92947 438 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-226ENST00000483656 FAM46BQ96A09 425 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 CYYR1Q96J86 154 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 RNF170Q96K19 258 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 GAL3ST1Q99999 423 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 ATG5Q9H1Y0 275 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 BANF2Q9H503 90 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 OCEL1Q9H607 264 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 NEK6Q9HC98 313 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 GHRLQ9UBU3 117 aa8.62□□□□□ -1.03
HDAC6-226ENST00000483656 MRPS7Q9Y2R9 242 aaKnown RBP8.62□□□□□ -1.03
HDAC6-226ENST00000483656 HIVEP3Q5T1R4 2406 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 TRAV18A0A075B6X5 111 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 A0A1W2PQ09 198 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 FOXI3A8MTJ6 420 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-226ENST00000483656 CTDSPLO15194 276 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 GSTZ1O43708 216 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-226ENST00000483656 C1QL1O75973 258 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 TPPPO94811 219 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 MPIG6BO95866 241 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 PLATP00750 562 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 GCH1P30793 250 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 DGCR2P98153 550 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 SORDQ00796 357 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 BSPH1Q075Z2 132 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 SLC22A6Q4U2R8 563 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 TMEM69Q5SWH9 247 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 NCMAPQ5T1S8 102 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 RGS7BPQ6MZT1 257 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-226ENST00000483656 MTFR2Q6P444 385 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 TMEM108Q6UXF1 575 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 DNM1P46Q6ZS02 220 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 FTMTQ8N4E7 242 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 FAM89BQ8N5H3 189 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 NUP37Q8NFH4 326 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 PXT1Q8NFP0 134 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 KCNG3Q8TAE7 436 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 CA5BP1Q8WTZ4 195 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 ITLN2Q8WWU7 325 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-226ENST00000483656 GTF3AQ92664 365 aaKnown RBP8.61□□□□□ -1.03
HDAC6-226ENST00000483656 YIPF5Q969M3 257 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 TRIM63Q969Q1 353 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 RADILQ96JH8 1075 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 HIST1H2AAQ96QV6 131 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 NICN1Q9BSH3 213 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 OR51I2Q9H344 312 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 HEATR1Q9H583 2144 aaKnown RBP8.61□□□□□ -1.03
HDAC6-226ENST00000483656 KCNJ16Q9NPI9 418 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 IL36GQ9NZH8 169 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 RABL2AQ9UBK7 228 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-226ENST00000483656 TBC1D24Q9ULP9 559 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 RABL2BQ9UNT1 228 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 SPEF1Q9Y4P9 236 aa8.61□□□□□ -1.03
HDAC6-226ENST00000483656 SMG1Q96Q15 3661 aaKnown RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 IGLV3-9A0A075B6K5 115 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 A0A0A6YYH2 397 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 ISPDA4D126 451 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 A6NJ64 397 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 OR5B21A6NL26 309 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 B8ZZF3 427 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 ABCD4O14678 606 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 PLA2G10O15496 165 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 SOCS1O15524 211 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 SIAH2O43255 324 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 SYNGR1O43759 233 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 TIMM8AO60220 97 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 ZG16O60844 167 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 CRTAPO75718 401 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 IGHV3-13P01766 116 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 SFTPBP07988 381 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 MGMTP16455 207 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 SERPINA2P20848 420 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 RANBP1P43487 201 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 VEGFCP49767 419 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 TMEM50BP56557 158 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 RPS27AP62979 156 aaKnown RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 GNG3P63215 75 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms