RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 RAB24Q969Q5 203 aa10.42□□□□□ -0.74
VTI1A-205ENST00000483122 NOL4LQ96MY1 436 aaPredicted RBP10.42□□□□□ -0.74
VTI1A-205ENST00000483122 CCNL2Q96S94 520 aaPredicted RBP10.42□□□□□ -0.74
VTI1A-205ENST00000483122 NUDT16L1Q9BRJ7 211 aaKnown RBP10.42□□□□□ -0.74
VTI1A-205ENST00000483122 S1PR5Q9H228 398 aa10.42□□□□□ -0.74
VTI1A-205ENST00000483122 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.42□□□□□ -0.74
VTI1A-205ENST00000483122 CENPMQ9NSP4 180 aa10.42□□□□□ -0.74
VTI1A-205ENST00000483122 LIPGQ9Y5X9 500 aa10.42□□□□□ -0.74
VTI1A-205ENST00000483122 EPOPA6NHQ4 379 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 E5RGE8 158 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 GPR137BO60478 399 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 IFI6P09912 130 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 ZNF93P35789 620 aaPredicted RBP10.41□□□□□ -0.74
VTI1A-205ENST00000483122 SNU13P55769 128 aaKnown RBP10.41□□□□□ -0.74
VTI1A-205ENST00000483122 ZNF440Q8IYI8 595 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 CYB561D1Q8N8Q1 229 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 BEND2Q8NDZ0 799 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 C16orf52Q8NHV5 167 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 TVP23CQ96ET8 276 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 FAM210BQ96KR6 192 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 METTL9Q9H1A3 318 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 OR14J1Q9UGF5 321 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 SUSD2Q9UGT4 822 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 C14orf166Q9Y224 244 aaKnown RBP10.41□□□□□ -0.74
VTI1A-205ENST00000483122 NSG2Q9Y328 171 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 PIAS3Q9Y6X2 628 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 OTOL1A6NHN0 477 aaPredicted RBP10.41□□□□□ -0.74
VTI1A-205ENST00000483122 CDC14BO60729 498 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 CTSBP07858 339 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 OR3A4PP47883 348 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 FOXK1P85037 733 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 AGBL4Q5VU57 503 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 VITQ6UXI7 678 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 SGPP2Q8IWX5 399 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 RERGQ96A58 199 aaPredicted RBP10.41□□□□□ -0.74
VTI1A-205ENST00000483122 C1orf147Q96MC9 270 aaPredicted RBP10.41□□□□□ -0.74
VTI1A-205ENST00000483122 ZFYVE21Q9BQ24 234 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 SIRT7Q9NRC8 400 aa10.41□□□□□ -0.74
VTI1A-205ENST00000483122 VSX1Q9NZR4 365 aaPredicted RBP10.41□□□□□ -0.74
VTI1A-205ENST00000483122 MRPS28Q9Y2Q9 187 aaKnown RBP10.41□□□□□ -0.74
VTI1A-205ENST00000483122 DVL1O14640 695 aa10.4□□□□□ -0.74
VTI1A-205ENST00000483122 IFNA21P01568 189 aa10.4□□□□□ -0.74
VTI1A-205ENST00000483122 TTRP02766 147 aa10.4□□□□□ -0.74
VTI1A-205ENST00000483122 CD200P41217 278 aa10.4□□□□□ -0.74
VTI1A-205ENST00000483122 TMEM176BQ3YBM2 270 aaPredicted RBP10.4□□□□□ -0.74
VTI1A-205ENST00000483122 SLC22A25Q6T423 547 aa10.4□□□□□ -0.74
VTI1A-205ENST00000483122 CDCA3Q99618 268 aaPredicted RBP10.4□□□□□ -0.74
VTI1A-205ENST00000483122 SNHG12Q9BXW3 62 aa10.4□□□□□ -0.74
VTI1A-205ENST00000483122 FBLN5Q9UBX5 448 aa10.4□□□□□ -0.74
VTI1A-205ENST00000483122 SLC17A4Q9Y2C5 497 aa10.4□□□□□ -0.74
VTI1A-205ENST00000483122 CHD9Q3L8U1 2897 aa10.4□□□□□ -0.74
VTI1A-205ENST00000483122 ZNF705GA8MUZ8 300 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-205ENST00000483122 FTCDNL1E5RQL4 147 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 TNFSF14O43557 240 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 HCRTR1O43613 425 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 AMBPP02760 352 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 FMODQ06828 376 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 ICAM4Q14773 271 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 DMRTC1Q5HYR2 192 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 CDCP2Q5VXM1 449 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 LANCL3Q6ZV70 420 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 ZFP62Q8NB50 900 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-205ENST00000483122 C5orf34Q96MH7 638 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 SMDT1Q9H4I9 107 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 MMACHCQ9Y4U1 282 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 HEBP2Q9Y5Z4 205 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 CPAMD8Q8IZJ3 1885 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 IGKV1D-8A0A087WSZ0 117 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 MARCH11A6NNE9 402 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 HIDE1A8MVS5 230 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 MBP02144 154 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 ZNF25P17030 456 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-205ENST00000483122 FUT3P21217 361 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 WASP42768 502 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 SP6Q3SY56 376 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 CCL4L1Q8NHW4 92 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 REEP6Q96HR9 211 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 TMEM59Q9BXS4 323 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 TWSG1Q9GZX9 223 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 FGF22Q9HCT0 170 aa10.39□□□□□ -0.75
VTI1A-205ENST00000483122 PHF3Q92576 2039 aaKnown RBP10.38□□□□□ -0.75
VTI1A-205ENST00000483122 CRTAPO75718 401 aaPredicted RBP10.38□□□□□ -0.75
VTI1A-205ENST00000483122 SCAF4O95104 1147 aaKnown RBP10.38□□□□□ -0.75
VTI1A-205ENST00000483122 H2BFMP0C1H6 154 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 ATXN8OSP0DMR3 200 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 ZNF823P16415 610 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 GLO1Q04760 184 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 SLC10A1Q14973 349 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.38□□□□□ -0.75
VTI1A-205ENST00000483122 PLPP5Q8NEB5 264 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 SLC22A18Q96BI1 424 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 RCC1LQ96I51 464 aaKnown RBP10.38□□□□□ -0.75
VTI1A-205ENST00000483122 NIPSNAP3BQ9BS92 247 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 GPR87Q9BY21 358 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 RTN4RQ9BZR6 473 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 TXNIPQ9H3M7 391 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 FAM206AQ9NX38 181 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 HLA-DOBP13765 273 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 KIR2DS3Q14952 304 aa10.38□□□□□ -0.75
VTI1A-205ENST00000483122 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms