RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 PRSS8Q16651 343 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 NRSN1Q8IZ57 195 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 SLC26A10Q8NG04 563 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 OR4N2Q8NGD1 307 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 STT3BQ8TCJ2 826 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 ZNF514Q96K75 400 aaPredicted RBP18.73■□□□□ 0.59
SDF4-206ENST00000478938 NAGKQ9UJ70 344 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 EMC9Q9Y3B6 208 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 LRRK1Q38SD2 2015 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 SOCS1O15524 211 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 RAB11AP62491 216 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 RPL23AP62750 156 aaKnown RBP18.73■□□□□ 0.59
SDF4-206ENST00000478938 GNB2P62879 340 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 TAF9Q16594 264 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 SLC8B1Q6J4K2 584 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 RNF144BQ7Z419 303 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 ZNF100Q8IYN0 542 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 SNIP1Q8TAD8 396 aaKnown RBP18.73■□□□□ 0.59
SDF4-206ENST00000478938 HLA-CQ95604 372 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 ST6GALNAC5Q9BVH7 336 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 EHFQ9NZC4 300 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 HHLA2Q9UM44 414 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 LAMP3Q9UQV4 416 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 IFNA21P01568 189 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 OR3A2P47893 321 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 ZFP36L1Q07352 338 aaKnown RBP18.72■□□□□ 0.59
SDF4-206ENST00000478938 SGCGQ13326 291 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 TMEM123Q8N131 208 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 NECAP1Q8NC96 275 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 ZFP30Q9Y2G7 519 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 A0A1W2PPQ1 181 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 CDC14CA4D256 554 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 ZNF705FA8MVS1 300 aaPredicted RBP18.72■□□□□ 0.59
SDF4-206ENST00000478938 IGKV1D-16P01601 117 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 RPLP2P05387 115 aaKnown RBP18.72■□□□□ 0.59
SDF4-206ENST00000478938 ZNF705DP0CH99 300 aaPredicted RBP18.72■□□□□ 0.59
SDF4-206ENST00000478938 ZNF705BP0CI00 300 aaPredicted RBP18.72■□□□□ 0.59
SDF4-206ENST00000478938 BCKDHBP21953 392 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 ATP6V0CP27449 155 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 CDKN1BP46527 198 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 FAM110CQ1W6H9 321 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 MAJINQ3KP22 176 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 CDCP2Q5VXM1 449 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 GPR34Q9UPC5 381 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 LRP12Q9Y561 859 aa18.72■□□□□ 0.59
SDF4-206ENST00000478938 A8MVM7 634 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 SPINT1O43278 529 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 RENP00797 406 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 OPN1MWP04001 364 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 OPN1MW2P0DN77 364 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 OPN1MW3P0DN78 364 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 CEACAM1P13688 526 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 RAB7AP51149 207 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 RAB38P57729 211 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 CDK3Q00526 305 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 ZNF117Q03924 483 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 NKAIN3Q8N8D7 197 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 CLDND2Q8NHS1 167 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 TMEM37Q8WXS4 190 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 REEP6Q96HR9 211 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 HIF3AQ9Y2N7 669 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 NXPH2O95156 264 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 CT62P0C5K7 136 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 PDLIM4P50479 330 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 UCP3P55916 312 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 TMEM25Q86YD3 366 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 TMEFF1Q8IYR6 380 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 SCARF2Q96GP6 870 aaPredicted RBP18.71■□□□□ 0.59
SDF4-206ENST00000478938 SPACA5Q96QH8 159 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 TBX15Q96SF7 602 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 TMEM242Q9NWH2 141 aa18.71■□□□□ 0.59
SDF4-206ENST00000478938 NSG1A0A0A6YYJ2 146 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 CEBPBP17676 345 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 CCKARP32238 428 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 DCAF7P61962 342 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 RPL18Q07020 188 aaKnown RBP18.7■□□□□ 0.58
SDF4-206ENST00000478938 CLEC12BQ2HXU8 276 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 FAM90A2PQ658T7 463 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 TMEM215Q68D42 235 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 ANAPC10Q9UM13 185 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 C14orf166Q9Y224 244 aaKnown RBP18.7■□□□□ 0.58
SDF4-206ENST00000478938 MRPS2Q9Y399 296 aaKnown RBP18.7■□□□□ 0.58
SDF4-206ENST00000478938 RNF151Q2KHN1 245 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 METRNLQ641Q3 311 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 SLC18B1Q6NT16 456 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 CLEC2AQ6UVW9 174 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 MRPL52Q86TS9 123 aaKnown RBP18.7■□□□□ 0.58
SDF4-206ENST00000478938 EMG1Q92979 244 aaKnown RBP18.7■□□□□ 0.58
SDF4-206ENST00000478938 SDSLQ96GA7 329 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 LRFN1Q9P244 771 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 PPIAL4AQ9Y536 164 aa18.7■□□□□ 0.58
SDF4-206ENST00000478938 P2RY10O00398 339 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 LATO43561 262 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 BPNT1O95861 308 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 ERVS71-1P61550 626 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 CSNK2A1P68400 391 aaPredicted RBP18.69■□□□□ 0.58
SDF4-206ENST00000478938 MLF2Q15773 248 aaPredicted RBP18.69■□□□□ 0.58
SDF4-206ENST00000478938 ZNF74Q16587 644 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 TDRG1Q3Y452 100 aa18.69■□□□□ 0.58
SDF4-206ENST00000478938 MORN1Q5T089 497 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms