RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 LGALS4P56470 323 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 GK3PQ14409 553 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 SMIM21Q3B7S5 101 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 CEACAM21Q3KPI0 293 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 DMRTC1Q5HYR2 192 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 HIST2H2BDQ6DRA6 164 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 HCP5Q6MZN7 132 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 HAGHLQ6PII5 290 aaPredicted RBP10.79□□□□□ -0.68
VCL-205ENST00000478896 CD300LDQ6UXZ3 194 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 MOB3CQ70IA8 216 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 MKXQ8IYA7 352 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 ARHGAP24Q8N264 748 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 PPP1R35Q8TAP8 253 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 NKX3-1Q99801 234 aaPredicted RBP10.79□□□□□ -0.68
VCL-205ENST00000478896 NPFFR1Q9GZQ6 430 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 OR51I2Q9H344 312 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 ZNF556Q9HAH1 456 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 C19orf12Q9NSK7 152 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 KLHDC2Q9Y2U9 406 aa10.79□□□□□ -0.68
VCL-205ENST00000478896 TMEM269A0A1B0GVZ9 245 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 hCG_1809904A0A1W2PP81 198 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 A0A1W2PPE2 198 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 A0A1W2PR64 198 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 A0A1W2PRV1 198 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 OR5B21A6NL26 309 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 B2RBV5 119 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 PSMD9O00233 223 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 SLC1A7O00341 560 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 GSC2O15499 205 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 RAP2AP10114 183 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 COX7A1P24310 79 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 KIR2DS4P43632 304 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 RPL31P62899 125 aaKnown RBP10.78□□□□□ -0.68
VCL-205ENST00000478896 GNGT1P63211 74 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 TRIM25Q14258 630 aaKnown RBP10.78□□□□□ -0.68
VCL-205ENST00000478896 GINS1Q14691 196 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 BEAN1Q3B7T3 259 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 SLC35D3Q5M8T2 416 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 LIAT1Q6ZQX7 453 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 CPOQ8IVL8 374 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 AQP3Q92482 292 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 CCDC124Q96CT7 223 aaKnown RBP10.78□□□□□ -0.68
VCL-205ENST00000478896 TEX12Q9BXU0 123 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 MROQ9BYG7 248 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 HEXA-AS1Q9H8Q6 139 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 ZNF222Q9UK12 451 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 PLXNB1O43157 2135 aa10.78□□□□□ -0.68
VCL-205ENST00000478896 A0A0U1RQV5 110 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 ARRDC5A6NEK1 342 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 RFPL4AA6NLU0 287 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 RFPL4AL1F8VTS6 287 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 E2F6O75461 281 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 HMGN1P05114 100 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 FAHP16930 419 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 BMXP51813 675 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 RIPPLY1Q0D2K3 151 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 FAM189A2Q15884 450 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 AANATQ16613 207 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 KCTD18Q6PI47 426 aaPredicted RBP10.77□□□□□ -0.69
VCL-205ENST00000478896 ACP7Q6ZNF0 438 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 ZNF561Q8N587 486 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 DTX3Q8N9I9 347 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 BBS1Q8NFJ9 593 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 OR4M1Q8NGD0 313 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 OR5A2Q8NGI9 324 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 OR5K1Q8NHB7 308 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 SDSLQ96GA7 329 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 TTTY10Q9BZA0 68 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 PBOV1Q9GZY1 135 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 MEGF9Q9H1U4 602 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 C1orf21Q9H246 121 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 FAM206AQ9NX38 181 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 RASL12Q9NYN1 266 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 USE1Q9NZ43 259 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 ENPP5Q9UJA9 477 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 GTF2A1LQ9UNN4 478 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 PIGLQ9Y2B2 252 aa10.77□□□□□ -0.69
VCL-205ENST00000478896 PIN1P1O15428 100 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 MTRF1O75570 445 aaKnown RBP10.76□□□□□ -0.69
VCL-205ENST00000478896 NRASP01111 189 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 PRB2P02812 416 aaPredicted RBP10.76□□□□□ -0.69
VCL-205ENST00000478896 MRPL3P09001 348 aaKnown RBP10.76□□□□□ -0.69
VCL-205ENST00000478896 OSMP13725 252 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 ATP6V1B1P15313 513 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 CCL3L1P16619 93 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 ALOX5APP20292 161 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 HAAOP46952 286 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 CEBPDP49716 269 aaPredicted RBP10.76□□□□□ -0.69
VCL-205ENST00000478896 HCCSP53701 268 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 ERVFRD-1P60508 538 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 MS4A2Q01362 244 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 APOFQ13790 326 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 ZNF829Q3KNS6 432 aaPredicted RBP10.76□□□□□ -0.69
VCL-205ENST00000478896 NSUN5P1Q3KNT7 163 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 PLA1AQ53H76 456 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 ZNF684Q5T5D7 378 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 SAMD5Q5TGI4 173 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 LCN1P1Q5VSP4 162 aa10.76□□□□□ -0.69
VCL-205ENST00000478896 ZNF782Q6ZMW2 699 aaPredicted RBP10.76□□□□□ -0.69
VCL-205ENST00000478896 TRPM8Q7Z2W7 1104 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms