RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 TMPRSS13Q9BYE2 586 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 OR51E2Q9H255 320 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 C7orf69Q9H7B7 122 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 EXOSC4Q9NPD3 245 aaKnown RBP6.94□□□□□ -1.3
HDAC6-221ENST00000477561 MMP26Q9NRE1 261 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 ACOXLQ9NUZ1 547 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 MRM2Q9UI43 246 aaKnown RBP6.94□□□□□ -1.3
HDAC6-221ENST00000477561 GSTK1Q9Y2Q3 226 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 PPIAL4AQ9Y536 164 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 TANC2Q9HCD6 1990 aa6.94□□□□□ -1.3
HDAC6-221ENST00000477561 TRBV2A0A0J9YWF9 115 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 PNMA8CA0A1B0GUJ8 204 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 TRDV1A0A1B0GX56 115 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 ANKRD30BLA7E2S9 258 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 PRR32B1ATL7 298 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 TRAPPC2LH3BP13 241 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 IFNL4K9M1U5 179 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 MAGEB4O15481 346 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-221ENST00000477561 GMDSO60547 372 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 FOXH1O75593 365 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 LALBAP00709 142 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 APOC1P02654 83 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 WNT2P09544 360 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 RPS2P15880 293 aaKnown RBP6.93□□□□□ -1.3
HDAC6-221ENST00000477561 DCTDP32321 178 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 CD80P33681 288 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 GATA4P43694 442 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 GSK3AP49840 483 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 VBP1P61758 197 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 LSM3P62310 102 aaKnown RBP6.93□□□□□ -1.3
HDAC6-221ENST00000477561 RPS25P62851 125 aaKnown RBP6.93□□□□□ -1.3
HDAC6-221ENST00000477561 ALKBH1Q13686 389 aaKnown RBP6.93□□□□□ -1.3
HDAC6-221ENST00000477561 DOC2BQ14184 412 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 CDK5R1Q15078 307 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF181Q2M3W8 571 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF829Q3KNS6 432 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-221ENST00000477561 KRTAP24-1Q3LI83 254 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 LIPNQ5VXI9 398 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 DMKNQ6E0U4 476 aaPredicted RBP6.93□□□□□ -1.3
HDAC6-221ENST00000477561 LYPD2Q6UXB3 125 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF826PQ6ZT77 177 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 RFLNBQ8N5W9 214 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 ZFP41Q8N8Y5 198 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 OR52H1Q8NGJ2 320 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 OR11L1Q8NGX0 322 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 TMEM158Q8WZ71 300 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 SPSB4Q96A44 273 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 SMIM19Q96E16 107 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 TMEM246Q9BRR3 403 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 SLC22A4Q9H015 551 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 OR10A2Q9H208 303 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 OPA3Q9H6K4 179 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 NIPAL2Q9H841 368 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 SP140LQ9H930 580 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 FN3KRPQ9HA64 309 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 C1orf123Q9NWV4 160 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 MRPL15Q9P015 296 aaKnown RBP6.93□□□□□ -1.3
HDAC6-221ENST00000477561 RNF7Q9UBF6 113 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 SF3B6Q9Y3B4 125 aaKnown RBP6.93□□□□□ -1.3
HDAC6-221ENST00000477561 RHBDD3Q9Y3P4 386 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 LRP12Q9Y561 859 aa6.93□□□□□ -1.3
HDAC6-221ENST00000477561 COL6A5A8TX70 2615 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-221ENST00000477561 hCG_38984A0A1B0GV85 526 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 hCG_1807616A0A1W2PRN6 198 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 A6NLC8 198 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 E9PI62 339 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 F5H0A9 414 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-221ENST00000477561 GPX5O75715 221 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 RPP14O95059 124 aaKnown RBP6.92□□□□□ -1.3
HDAC6-221ENST00000477561 FGF9P31371 208 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-221ENST00000477561 DDOSTP39656 456 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 PSMB10P40306 273 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 SERPINB10P48595 397 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 CCR9P51686 369 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 NCS1P62166 190 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 SPCS2Q15005 226 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 OR8B8Q15620 311 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 DGUOKQ16854 277 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF404Q494X3 552 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 ESCO2Q56NI9 601 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 YIF1BQ5BJH7 314 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 FDX2Q6P4F2 183 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 CD200R1LQ6Q8B3 271 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 C1orf87Q8N0U7 546 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 MUC20Q8N307 709 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-221ENST00000477561 CELF2-AS1Q8N7Q2 184 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 OR8B12Q8NGG6 310 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 OR8S1Q8NH09 359 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 Q8TCH9 128 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 C22orf15Q8WYQ4 148 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 PHYHIPQ92561 330 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 THRSPQ92748 146 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 GHSRQ92847 366 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 RPL3LQ92901 407 aaKnown RBP6.92□□□□□ -1.3
HDAC6-221ENST00000477561 TMEM203Q969S6 136 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 ERGIC1Q969X5 290 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 PPP1R14AQ96A00 147 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 LYZL4Q96KX0 146 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 KCTD7Q96MP8 289 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms