RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 GPR61Q9BZJ8 451 aa13.18□□□□□ -0.3
APOBEC3F-203ENST00000476513 EGLN3Q9H6Z9 239 aa13.18□□□□□ -0.3
APOBEC3F-203ENST00000476513 BIRC6Q9NR09 4857 aa13.18□□□□□ -0.3
APOBEC3F-203ENST00000476513 EPPK1P58107 5090 aaKnown RBP13.18□□□□□ -0.3
APOBEC3F-203ENST00000476513 RFPL4AA6NLU0 287 aa13.17□□□□□ -0.3
APOBEC3F-203ENST00000476513 RFPL4AL1F8VTS6 287 aa13.17□□□□□ -0.3
APOBEC3F-203ENST00000476513 MTRF1O75570 445 aaKnown RBP13.17□□□□□ -0.3
APOBEC3F-203ENST00000476513 APOC1P02654 83 aa13.17□□□□□ -0.3
APOBEC3F-203ENST00000476513 DLX6P56179 175 aa13.17□□□□□ -0.3
APOBEC3F-203ENST00000476513 SMIM11AP58511 58 aa13.17□□□□□ -0.3
APOBEC3F-203ENST00000476513 ZDHHC23Q8IYP9 409 aa13.17□□□□□ -0.3
APOBEC3F-203ENST00000476513 LINC00471Q8N535 108 aa13.17□□□□□ -0.3
APOBEC3F-203ENST00000476513 OR2T27Q8NH04 317 aa13.17□□□□□ -0.3
APOBEC3F-203ENST00000476513 RNF133Q8WVZ7 376 aa13.17□□□□□ -0.3
APOBEC3F-203ENST00000476513 CHID1Q9BWS9 393 aa13.17□□□□□ -0.3
APOBEC3F-203ENST00000476513 OR51I2Q9H344 312 aa13.17□□□□□ -0.3
APOBEC3F-203ENST00000476513 STAB2Q8WWQ8 2551 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 C17orf98A8MV24 154 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 CLUP10909 449 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 SPI1P17947 270 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 SF3A3Q12874 501 aaKnown RBP eCLIP13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 TSPAN31Q12999 210 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 ZNF626Q68DY1 528 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 CALHM1Q8IU99 346 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 ZNF561Q8N587 486 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 OR52L1Q8NGH7 329 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 ZNF671Q8TAW3 534 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 GNPDA2Q8TDQ7 276 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 LYZL4Q96KX0 146 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 HIST1H2AAQ96QV6 131 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 AMELYQ99218 206 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 KCTD14Q9BQ13 255 aaPredicted RBP13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 ABHD6Q9BV23 337 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 NMNAT2Q9BZQ4 307 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 CDH10Q9Y6N8 788 aa13.16□□□□□ -0.3
APOBEC3F-203ENST00000476513 ZNF732B4DXR9 585 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 CHRM2P08172 466 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 CCDC159P0C7I6 412 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 IFNGR2P38484 337 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 OPRL1P41146 370 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 CEBPDP49716 269 aaPredicted RBP13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 GNG3P63215 75 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 CRMP1Q14194 572 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 KHDC1LQ5JSQ8 128 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 C8orf82Q6P1X6 216 aaPredicted RBP13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 C10orf99Q6UWK7 81 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 ACP7Q6ZNF0 438 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 MRPL41Q8IXM3 137 aaKnown RBP13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 OR11H6Q8NGC7 330 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 OR4X2Q8NGF9 303 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 OR13D1Q8NGV5 346 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 OR6K6Q8NGW6 343 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 AQP3Q92482 292 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 HOPXQ9BPY8 73 aaPredicted RBP13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 C1orf21Q9H246 121 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 DCAF13Q9NV06 445 aaKnown RBP13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 RASL12Q9NYN1 266 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 PCDHGB5Q9Y5G0 923 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 HILPDAQ9Y5L2 63 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 TENM2Q9NT68 2774 aa13.15□□□□□ -0.3
APOBEC3F-203ENST00000476513 FAM90A22PA8MWA6 464 aa13.14□□□□□ -0.31
APOBEC3F-203ENST00000476513 SLC1A7O00341 560 aa13.14□□□□□ -0.31
APOBEC3F-203ENST00000476513 PIPP12273 146 aaPredicted RBP13.14□□□□□ -0.31
APOBEC3F-203ENST00000476513 PRDX2P32119 198 aa13.14□□□□□ -0.31
APOBEC3F-203ENST00000476513 OR12D2P58182 307 aa13.14□□□□□ -0.31
APOBEC3F-203ENST00000476513 DMRTC1Q5HYR2 192 aa13.14□□□□□ -0.31
APOBEC3F-203ENST00000476513 LINC01590Q5TEZ4 76 aa13.14□□□□□ -0.31
APOBEC3F-203ENST00000476513 ETV3LQ6ZN32 361 aa13.14□□□□□ -0.31
APOBEC3F-203ENST00000476513 OR8D4Q8NGM9 314 aa13.14□□□□□ -0.31
APOBEC3F-203ENST00000476513 OR6N2Q8NGY6 317 aa13.14□□□□□ -0.31
APOBEC3F-203ENST00000476513 SAMD4AQ9UPU9 718 aaKnown RBP13.14□□□□□ -0.31
APOBEC3F-203ENST00000476513 DYNC1I1O14576 645 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 SEMG1P04279 462 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 AZGP1P25311 298 aaKnown RBP13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 LMO1P25800 156 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 SLC34A1Q06495 639 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 DYNC1I2Q13409 638 aaKnown RBP13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 SMIM21Q3B7S5 101 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 CEP78Q5JTW2 689 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 NKAPLQ5M9Q1 402 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 GLYATQ6IB77 296 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 ZNF770Q6IQ21 691 aaPredicted RBP13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 LCN8Q6JVE9 175 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 RPL13AP3Q6NVV1 102 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 HAGHLQ6PII5 290 aaPredicted RBP13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 POC1AQ8NBT0 407 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 RP9Q8TA86 221 aaKnown RBP13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 ZNF488Q96MN9 340 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 IL20Q9NYY1 176 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 V9GYQ6 96 aa13.13□□□□□ -0.31
APOBEC3F-203ENST00000476513 MEX3AA1L020 520 aaKnown RBP13.12□□□□□ -0.31
APOBEC3F-203ENST00000476513 SLC22A2O15244 555 aa13.12□□□□□ -0.31
APOBEC3F-203ENST00000476513 TK1P04183 234 aa13.12□□□□□ -0.31
APOBEC3F-203ENST00000476513 LPLP06858 475 aa13.12□□□□□ -0.31
APOBEC3F-203ENST00000476513 H2BFMP0C1H6 154 aa13.12□□□□□ -0.31
APOBEC3F-203ENST00000476513 BLVRAP53004 296 aa13.12□□□□□ -0.31
APOBEC3F-203ENST00000476513 CEACAM21Q3KPI0 293 aa13.12□□□□□ -0.31
APOBEC3F-203ENST00000476513 KRT74Q7RTS7 529 aa13.12□□□□□ -0.31
APOBEC3F-203ENST00000476513 ERI1Q8IV48 349 aaKnown RBP13.12□□□□□ -0.31
APOBEC3F-203ENST00000476513 INTS14Q96SY0 518 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms