RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 HIST2H3PS2Q5TEC6 136 aa16.39■□□□□ 0.21
ECHDC1-214ENST00000474289 TGIF2LXQ8IUE1 241 aa16.39■□□□□ 0.21
ECHDC1-214ENST00000474289 WDFY1Q8IWB7 410 aa16.39■□□□□ 0.21
ECHDC1-214ENST00000474289 SFTPA2Q8IWL1 248 aa16.39■□□□□ 0.21
ECHDC1-214ENST00000474289 C5orf34Q96MH7 638 aa16.39■□□□□ 0.21
ECHDC1-214ENST00000474289 CFHR5Q9BXR6 569 aa16.39■□□□□ 0.21
ECHDC1-214ENST00000474289 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.39■□□□□ 0.215e-12■■■■■ 43.9
ECHDC1-214ENST00000474289 GPR137BO60478 399 aa16.39■□□□□ 0.21
ECHDC1-214ENST00000474289 DIRAS3O95661 229 aa16.39■□□□□ 0.21
ECHDC1-214ENST00000474289 ATXN8OSP0DMR3 200 aa16.39■□□□□ 0.21
ECHDC1-214ENST00000474289 ZNF20P17024 532 aa16.39■□□□□ 0.21
ECHDC1-214ENST00000474289 SULF2Q8IWU5 870 aa16.39■□□□□ 0.21
ECHDC1-214ENST00000474289 OR51E1Q8TCB6 317 aa16.39■□□□□ 0.21
ECHDC1-214ENST00000474289 SOX7Q9BT81 388 aa16.39■□□□□ 0.21
ECHDC1-214ENST00000474289 RBFOX3A6NFN3 312 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 TRGC1P0CF51 173 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 NHLH2Q02577 135 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 GPM6BQ13491 265 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 RUNX3Q13761 415 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 CHRFAM7AQ494W8 412 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 ABHD5Q8WTS1 349 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 DAZLQ92904 295 aaKnown RBP16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 PACRGQ96M98 296 aaPredicted RBP16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 UNKLQ9H9P5 680 aaKnown RBP16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 TP53TG5Q9Y2B4 290 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 SLCO1B1Q9Y6L6 691 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 RANBP2P49792 3224 aaKnown RBP16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 CRYM-AS1A6NIL9 109 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 CLDN4O14493 209 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 PLRG1O43660 514 aaKnown RBP16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 NPIPB7O75200 414 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 KLHL24Q6TFL4 600 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 OR13D1Q8NGV5 346 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 M1APQ8TC57 530 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 FRZBQ92765 325 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 SLAMF6Q96DU3 332 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 MVB12AQ96EY5 273 aa16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 RBM14Q96PK6 669 aaKnown RBP16.38■□□□□ 0.21
ECHDC1-214ENST00000474289 MKRN2OSH3BPM6 223 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 TCAPO15273 167 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 IL2RGP31785 369 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 RND3P61587 244 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 OR10A2Q9H208 303 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 KCNIP3Q9Y2W7 256 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 RFNGQ9Y644 331 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 IGKV1D-8A0A087WSZ0 117 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 QDPRP09417 244 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 IL11P20809 199 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 GPR157Q5UAW9 335 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 ZNF776Q68DI1 518 aaPredicted RBP16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 AVL9Q8NBF6 648 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 OR14K1Q8NGZ2 314 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 OIT3Q8WWZ8 545 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 SHDQ96IW2 340 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 TMEM68Q96MH6 324 aa16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 ZNF2Q9BSG1 426 aaPredicted RBP16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 URM1Q9BTM9 101 aaKnown RBP16.37■□□□□ 0.21
ECHDC1-214ENST00000474289 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 HPNP05981 417 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 SRP19P09132 144 aaKnown RBP16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 ZNF385CQ66K41 422 aaPredicted RBP16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 ZNF429Q86V71 674 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 OR51T1Q8NGJ9 327 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 OR5R1Q8NH85 324 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 HIST1H2BLQ99880 126 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 ABHD14AQ9BUJ0 271 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 TMED7-TICAM2A0A0A6YYA0 188 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 C17orf105B2RV13 164 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 ZNF878C9JN71 531 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 HCKP08631 526 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 SNRPCP09234 159 aaKnown RBP16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 CASP6P55212 293 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 USF2Q15853 346 aaPredicted RBP16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 DMRTC1Q5HYR2 192 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 C1orf53Q5VUE5 145 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 SPSB3Q6PJ21 355 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 DNM1P34Q6PK57 102 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 COMMD2Q86X83 199 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 OR10S1Q8NGN2 331 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 GPER1Q99527 375 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 C8orf33Q9H7E9 229 aaPredicted RBP16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 CRLF2Q9HC73 371 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 SIRT7Q9NRC8 400 aa16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 ZNF701Q9NV72 531 aaPredicted RBP16.36■□□□□ 0.21
ECHDC1-214ENST00000474289 CDRT15L2A8MXV6 281 aa16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 ADAM10O14672 748 aa16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 CTSDP07339 412 aaPredicted RBP16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 GP1BBP13224 206 aa16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 GLIPR1P48060 266 aa16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 ASCL1P50553 236 aa16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 OR8G1Q15617 311 aa16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 SP6Q3SY56 376 aa16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 METTL27Q8N6F8 245 aaPredicted RBP16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 CYB561D1Q8N8Q1 229 aa16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 PLA2G2FQ9BZM2 168 aa16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 SLC25A31Q9H0C2 315 aa16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 LIPGQ9Y5X9 500 aa16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 NSG1A0A0A6YYJ2 146 aa16.35■□□□□ 0.21
ECHDC1-214ENST00000474289 A0A1B0GWJ7 208 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms