RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 LINC00310P59036 64 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 UBE2NP61088 152 aaKnown RBP4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 HYAL1Q12794 435 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 MMDQ15546 238 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 CEBPEQ15744 281 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 ATXN7L2Q5T6C5 722 aaPredicted RBP4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 CLEC18BQ6UXF7 455 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 TMEM144Q7Z5S9 345 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 C20orf196Q8IYI0 205 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 OR51A2Q8NGJ7 313 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 OR6K2Q8NGY2 324 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 SUN3Q8TAQ9 357 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 RSPRY1Q96DX4 576 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 SMIM19Q96E16 107 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 KTI12Q96EK9 354 aaPredicted RBP4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 NEIL1Q96FI4 390 aaPredicted RBP4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 MS4A10Q96PG2 267 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 OR2V2Q96R30 315 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 MYADMQ96S97 322 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 PLA2G12AQ9BZM1 189 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 OR6C3Q9NZP0 311 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 CLN8Q9UBY8 286 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 FUT9Q9Y231 359 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 SIGLEC7Q9Y286 467 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 YIPF1Q9Y548 306 aa4.52□□□□□ -1.69
TMEM39A-206ENST00000473684 A0A1W2PNV4 684 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 MBD3L4A6NDZ8 208 aaPredicted RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 MBD3L3A6NE82 208 aaPredicted RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 MSGN1A6NI15 193 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF785A8K8V0 405 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SOCS6O14544 535 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC16A5O15375 505 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 TAPBPO15533 448 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 NME2P1O60361 137 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 FGF1P05230 155 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ANK1P16157 1881 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 RPS4Y1P22090 263 aaKnown RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 TSFMP43897 325 aaKnown RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SLURP1P55000 103 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 UCP3P55916 312 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 OR12D2P58182 307 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 FAM3BP58499 235 aaPredicted RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 DCAF7P61962 342 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 PAX2Q02962 417 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF763Q0D2J5 394 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 LASP1Q14847 261 aaKnown RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 DECR1Q16698 335 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ZXDCQ2QGD7 858 aaPredicted RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 C18orf21Q32NC0 220 aaPredicted RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 HNRNPA1L2Q32P51 320 aaKnown RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 PLEKHS1Q5SXH7 462 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 LYPLAL1Q5VWZ2 237 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ACOT1Q86TX2 421 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 NIT1Q86X76 327 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ARHGAP12Q8IWW6 846 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 MTURNQ8N3F0 131 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 CHST13Q8NET6 341 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 OR52E1Q8NGJ3 308 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 OR52M1Q8NGK5 317 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 OR10G4Q8NGN3 311 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SCAMP4Q969E2 229 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 LOXL4Q96JB6 756 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 CAPNS2Q96L46 248 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 PYGO2Q9BRQ0 406 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 CABLES2Q9BTV7 478 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 FNDC11Q9BVV2 318 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF106Q9H2Y7 1883 aaKnown RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF319Q9P2F9 582 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 NYNRINQ9P2P1 1898 aaKnown RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ST6GALNAC2Q9UJ37 374 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 FBXO4Q9UKT5 387 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 PIKFYVEQ9Y2I7 2098 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 OR4C45A6NMZ5 311 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 H0YIZ8 118 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 TRAPPC2LH3BP13 241 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 PRICKLE3O43900 615 aaPredicted RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 YPEL1O60688 119 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 CD160O95971 181 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 HSPB1P04792 205 aaKnown RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 LIPFP07098 398 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC35E2P0CK97 266 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 AKR1C4P17516 323 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ACVR1BP36896 505 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC25A1P53007 311 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 RIPPLY3P57055 190 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 TAS2R31P59538 309 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 PITX1P78337 314 aaPredicted RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 CSNK1G2P78368 415 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 HLA-DRB3P79483 266 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC17A1Q14916 467 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 VAMP3Q15836 100 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ARHGAP11BQ3KRB8 267 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 TPTE2P1Q5T6R2 138 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 TOMM20LQ6UXN7 152 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 MEPCEQ7L2J0 689 aaKnown RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ABHD12BQ7Z5M8 362 aaPredicted RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SCN4BQ8IWT1 228 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 TMEM99Q8N816 258 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 MORN4Q8NDC4 146 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 OR52L2PQ8NGH6 319 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms