RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 NUDT9Q9BW91 350 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 ACTR3CQ9C0K3 210 aaPredicted RBP8.93□□□□□ -0.98
APTX-216ENST00000472896 PRO1933Q9H354 126 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 WDR76Q9H967 626 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 FLRT3Q9NZU0 649 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 IKZF2Q9UKS7 526 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 RAB22AQ9UL26 194 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 AMDHD2Q9Y303 409 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 LOC100509620A0A075B734 347 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 BORCS7-ASMTA0A0B4J1R7 106 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 CENPVL1A0A0U1RR11 272 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 TMEM269A0A1B0GVZ9 245 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 PRSS38A1L453 326 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 CLDN1O95832 211 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 CSN2P05814 226 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 IGFBP3P17936 291 aaPredicted RBP8.92□□□□□ -0.98
APTX-216ENST00000472896 TCN2P20062 427 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 GABRR1P24046 479 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 LMO1P25800 156 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 THBS4P35443 961 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 KIR3DL2P43630 455 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 GPR3P46089 330 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 GAGE1Q13065 139 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 ALG10BQ5I7T1 473 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 SOHLH1Q5JUK2 328 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 C1orf100Q5SVJ3 147 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 FCRL6Q6DN72 434 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 RPUSD3Q6P087 351 aaKnown RBP8.92□□□□□ -0.98
APTX-216ENST00000472896 LEG1Q6P5S2 330 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 ULK3Q6PHR2 472 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 ZNF550Q7Z398 422 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 ZNF615Q8N8J6 731 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 CDRT4Q8N9R6 151 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 AVL9Q8NBF6 648 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 SUMF2Q8NBJ7 301 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 FAM46BQ96A09 425 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 PTCHD1Q96NR3 888 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 LMF1Q96S06 567 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 MENTQ9BUN1 341 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 GPR61Q9BZJ8 451 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 PLEKHA2Q9HB19 425 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 PLA2G2EQ9NZK7 142 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 PRODH2Q9UF12 536 aa8.92□□□□□ -0.98
APTX-216ENST00000472896 C19orf53Q9UNZ5 99 aaPredicted RBP8.92□□□□□ -0.98
APTX-216ENST00000472896 ANKRD17O75179 2603 aaKnown RBP8.92□□□□□ -0.98
APTX-216ENST00000472896 MDC1Q14676 2089 aaKnown RBP8.92□□□□□ -0.98
APTX-216ENST00000472896 TRBV23OR9-2A0A075B6M9 112 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 SYNDIG1LA6NDD5 238 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 C9J4A7 227 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 CEACAM5P06731 702 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 SOD3P08294 240 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 LINC00614P0C842 121 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 RPL12P30050 165 aaKnown RBP8.91□□□□□ -0.98
APTX-216ENST00000472896 GRPRP30550 384 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 IL2RGP31785 369 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 CAMLGP49069 296 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 RAB32Q13637 225 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 EIF2B1Q14232 305 aaKnown RBP8.91□□□□□ -0.98
APTX-216ENST00000472896 PPA1Q15181 289 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 HIKESHIQ53FT3 197 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 EMC4Q5J8M3 183 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 ZNF385CQ66K41 422 aaPredicted RBP8.91□□□□□ -0.98
APTX-216ENST00000472896 TMEM225Q6GV28 225 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 PPP1R3BQ86XI6 285 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 ZNF761Q86XN6 746 aaPredicted RBP8.91□□□□□ -0.98
APTX-216ENST00000472896 ZNF547Q8IVP9 402 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 PRSS35Q8N3Z0 413 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 COX18Q8N8Q8 333 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 HSD17B11Q8NBQ5 300 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 OR8G5Q8NG78 346 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 OR4S1Q8NGB4 309 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 OR10AC1Q8NH08 325 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 METTL21AQ8WXB1 218 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 RCC1LQ96I51 464 aaKnown RBP8.91□□□□□ -0.98
APTX-216ENST00000472896 PACRGQ96M98 296 aaPredicted RBP8.91□□□□□ -0.98
APTX-216ENST00000472896 C5orf34Q96MH7 638 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 GNRHR2Q96P88 292 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 TGM7Q96PF1 710 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 GPR132Q9UNW8 380 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 DHDHQ9UQ10 334 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 KLHDC2Q9Y2U9 406 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 SHANK1Q9Y566 2161 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 TNRC6AQ8NDV7 1962 aaKnown RBP8.91□□□□□ -0.98
APTX-216ENST00000472896 CELSR2Q9HCU4 2923 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 A0A087WV62 115 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 A0A1W2PS29 197 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 TMEM235A6NFC5 223 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 FIGNL2A6NMB9 653 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 K7EPK0 472 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 TXNDC12O95881 172 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 GCGP01275 180 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 SFTPBP07988 381 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 NGFRP08138 427 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 METTL15P1P0C7V9 234 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 ALOX5APP20292 161 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 PSMB5P28074 263 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 BCL6P41182 706 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 GPR1P46091 355 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 PCP4P48539 62 aa8.91□□□□□ -0.98
APTX-216ENST00000472896 RPS4XP62701 263 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms