RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 ACSM1Q08AH1 577 aa16.18■□□□□ 0.18
COL9A3-210ENST00000472880 CEACAM21Q3KPI0 293 aa16.18■□□□□ 0.18
COL9A3-210ENST00000472880 THAP5Q7Z6K1 395 aa16.18■□□□□ 0.18
COL9A3-210ENST00000472880 TMEM185AQ8NFB2 350 aa16.18■□□□□ 0.18
COL9A3-210ENST00000472880 C16orf95Q9H693 158 aa16.18■□□□□ 0.18
COL9A3-210ENST00000472880 YY1AP1Q9H869 796 aa16.18■□□□□ 0.18
COL9A3-210ENST00000472880 ELL3Q9HB65 397 aaPredicted RBP16.18■□□□□ 0.18
COL9A3-210ENST00000472880 SLC25A19Q9HC21 320 aa16.18■□□□□ 0.18
COL9A3-210ENST00000472880 FAM206AQ9NX38 181 aa16.18■□□□□ 0.18
COL9A3-210ENST00000472880 ANKRD61A6NGH8 418 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 OR5B21A6NL26 309 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 PSMD9O00233 223 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 MRPL3P09001 348 aaKnown RBP16.17■□□□□ 0.18
COL9A3-210ENST00000472880 ATP6V1B1P15313 513 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 PRKACGP22612 351 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 TGFBR2P37173 567 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 HCCSP53701 268 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 CBX1P83916 185 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 LCN1P1Q5VSP4 162 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 TMEM236Q5W0B7 351 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 DEGS2Q6QHC5 323 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 ZNF671Q8TAW3 534 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 ITFG2Q969R8 447 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 DUS3LQ96G46 650 aaKnown RBP16.17■□□□□ 0.18
COL9A3-210ENST00000472880 MROQ9BYG7 248 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 OR51I2Q9H344 312 aa16.17■□□□□ 0.18
COL9A3-210ENST00000472880 IGKV1D-17A0A075B6S4 117 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 TRBV23-1A0A0A0MS06 115 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 SLC22A31A6NKX4 558 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 H0YAE9 185 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 PSG2P11465 335 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 CAPZA1P52907 286 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 RIPPLY1Q0D2K3 151 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 SNAPC1Q16533 368 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 ZNF829Q3KNS6 432 aaPredicted RBP16.16■□□□□ 0.18
COL9A3-210ENST00000472880 PLCXD3Q63HM9 321 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 HAGHLQ6PII5 290 aaPredicted RBP16.16■□□□□ 0.18
COL9A3-210ENST00000472880 MOB3CQ70IA8 216 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 FAM185AQ8N0U4 392 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 ZNRF1Q8ND25 227 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 OR5A2Q8NGI9 324 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 OR5D13Q8NGL4 314 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 PBOV1Q9GZY1 135 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 GPR84Q9NQS5 396 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 TVP23BQ9NYZ1 205 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 ZNF222Q9UK12 451 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 TMEM14AQ9Y6G1 99 aa16.16■□□□□ 0.18
COL9A3-210ENST00000472880 ANGPTL7O43827 346 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 TSPAN9O75954 239 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 DMRTC1Q5HYR2 192 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 ZBTB37Q5TC79 503 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 KRT74Q7RTS7 529 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 OR51E1Q8TCB6 317 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 ASB17Q8WXJ9 295 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 DNAJC9Q8WXX5 260 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 AQP3Q92482 292 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 TTTY10Q9BZA0 68 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 PPA2Q9H2U2 334 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 DNAJB9Q9UBS3 223 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 ENPP5Q9UJA9 477 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 IKZF2Q9UKS7 526 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 PIGLQ9Y2B2 252 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 SF3B6Q9Y3B4 125 aaKnown RBP16.15■□□□□ 0.18
COL9A3-210ENST00000472880 MAB21L2Q9Y586 359 aa16.15■□□□□ 0.18
COL9A3-210ENST00000472880 ZNF254O75437 659 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 TSPAN15O95858 294 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 FAHP16930 419 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 RIDAP52758 137 aaKnown RBP16.14■□□□□ 0.17
COL9A3-210ENST00000472880 EGR3Q06889 387 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 C2orf68Q2NKX9 166 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 SMIM21Q3B7S5 101 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 ZNF679Q8IYX0 411 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 BEND2Q8NDZ0 799 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 OR51G2Q8NGK0 314 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 SDSLQ96GA7 329 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 OR8B4Q96RC9 309 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 CNN2Q99439 309 aaKnown RBP16.14■□□□□ 0.17
COL9A3-210ENST00000472880 TEAD3Q99594 435 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 PAPOLBQ9NRJ5 636 aaKnown RBP16.14■□□□□ 0.17
COL9A3-210ENST00000472880 RASL12Q9NYN1 266 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 NUFIP1Q9UHK0 495 aaKnown RBP16.14■□□□□ 0.17
COL9A3-210ENST00000472880 GTF2A1LQ9UNN4 478 aa16.14■□□□□ 0.17
COL9A3-210ENST00000472880 CCDC182A6NF36 153 aa16.13■□□□□ 0.17
COL9A3-210ENST00000472880 H3BUX3 64 aa16.13■□□□□ 0.17
COL9A3-210ENST00000472880 MTRF1O75570 445 aaKnown RBP16.13■□□□□ 0.17
COL9A3-210ENST00000472880 IGLV3-1P01715 115 aa16.13■□□□□ 0.17
COL9A3-210ENST00000472880 ROM1Q03395 351 aa16.13■□□□□ 0.17
COL9A3-210ENST00000472880 ZNF684Q5T5D7 378 aa16.13■□□□□ 0.17
COL9A3-210ENST00000472880 POC1AQ8NBT0 407 aa16.13■□□□□ 0.17
COL9A3-210ENST00000472880 PRRG3Q9BZD7 231 aa16.13■□□□□ 0.17
COL9A3-210ENST00000472880 COPS3Q9UNS2 423 aa16.13■□□□□ 0.17
COL9A3-210ENST00000472880 A0A1W2PPH5 198 aa16.12■□□□□ 0.17
COL9A3-210ENST00000472880 PRR32B1ATL7 298 aa16.12■□□□□ 0.17
COL9A3-210ENST00000472880 SLC1A7O00341 560 aa16.12■□□□□ 0.17
COL9A3-210ENST00000472880 DHRS3O75911 302 aa16.12■□□□□ 0.17
COL9A3-210ENST00000472880 NRASP01111 189 aa16.12■□□□□ 0.17
COL9A3-210ENST00000472880 GABRA5P31644 462 aa16.12■□□□□ 0.17
COL9A3-210ENST00000472880 CRISP1P54107 249 aa16.12■□□□□ 0.17
COL9A3-210ENST00000472880 MFGE8Q08431 387 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-210ENST00000472880 C1orf146Q5VVC0 180 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms