RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 SMN1Q16637 294 aaKnown RBP7.6□□□□□ -1.19
SYN3-211ENST00000472027 KRTAP24-1Q3LI83 254 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 KLHL22Q53GT1 634 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 ARMCX4Q5H9R4 360 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 KLF17Q5JT82 389 aaPredicted RBP7.6□□□□□ -1.19
SYN3-211ENST00000472027 ATPAF1Q5TC12 328 aaPredicted RBP7.6□□□□□ -1.19
SYN3-211ENST00000472027 ZNF691Q5VV52 312 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 TMEM244Q5VVB8 128 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 TTC23Q5W5X9 447 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 STUMQ69YW2 141 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 FDX2Q6P4F2 183 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 DUX4L9Q6RFH8 374 aaPredicted RBP7.6□□□□□ -1.19
SYN3-211ENST00000472027 SLC36A1Q7Z2H8 476 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 ZNF573Q86YE8 665 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 DHRSXQ8N5I4 330 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 PACRGLQ8N7B6 248 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 CCDC54Q8NEL0 328 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 OR52I1Q8NGK6 324 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 OR2G2Q8NGZ5 317 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 CYGBQ8WWM9 190 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 AQP3Q92482 292 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 MRPL48Q96GC5 212 aaKnown RBP7.6□□□□□ -1.19
SYN3-211ENST00000472027 C4orf36Q96KX1 117 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 MYCBPQ99417 103 aaPredicted RBP7.6□□□□□ -1.19
SYN3-211ENST00000472027 ZNF649Q9BS31 505 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 ALG8Q9BVK2 526 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 ISG20L2Q9H9L3 353 aaKnown RBP7.6□□□□□ -1.19
SYN3-211ENST00000472027 PLEKHA1Q9HB21 404 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 ERVK13-1Q9NX77 482 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 DNAJB11Q9UBS4 358 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 DUX4Q9UBX2 424 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 NUP50Q9UKX7 468 aa7.6□□□□□ -1.19
SYN3-211ENST00000472027 A0A0A6YYJ9 748 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 FAM230AA0A1W2PPH8 454 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 PQLC2LA1A4F0 135 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 ANKRD61A6NGH8 418 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 CASQ2O14958 399 aaPredicted RBP7.59□□□□□ -1.19
SYN3-211ENST00000472027 SYNGR1O43759 233 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 ENSAO43768 121 aaKnown RBP7.59□□□□□ -1.19
SYN3-211ENST00000472027 RGS9O75916 674 aaPredicted RBP7.59□□□□□ -1.19
SYN3-211ENST00000472027 VENTXO95231 258 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 SERPINA3P01011 423 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 TFF1P04155 84 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 ISG15P05161 165 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 LIPFP07098 398 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 HTR1AP08908 422 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 PPIAL4GP0DN37 164 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 FPR2P25090 351 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 HAAOP46952 286 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 TGM4P49221 684 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 CCR9P51686 369 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 ACTA2P62736 377 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 ACTG2P63267 376 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 ADARB1P78563 741 aaKnown RBP7.59□□□□□ -1.19
SYN3-211ENST00000472027 GABPB1Q06547 395 aaPredicted RBP7.59□□□□□ -1.19
SYN3-211ENST00000472027 ALKBH1Q13686 389 aaKnown RBP7.59□□□□□ -1.19
SYN3-211ENST00000472027 UBE2V2Q15819 145 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 OGFRL1Q5TC84 451 aaPredicted RBP7.59□□□□□ -1.19
SYN3-211ENST00000472027 ZNF788Q6ZQV5 615 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 BTN2A1Q7KYR7 527 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 ANGPTL5Q86XS5 388 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 EGFL6Q8IUX8 553 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 PHC2Q8IXK0 858 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 SYS1Q8N2H4 156 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 FGFRL1Q8N441 504 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 FAM216BQ8N7L0 139 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 ANGPTL6Q8NI99 470 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 CNIH3Q8TBE1 160 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 TRMT10AQ8TBZ6 339 aaKnown RBP7.59□□□□□ -1.19
SYN3-211ENST00000472027 ZNF418Q8TF45 676 aaPredicted RBP7.59□□□□□ -1.19
SYN3-211ENST00000472027 C22orf15Q8WYQ4 148 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 ST8SIA4Q92187 359 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 TMIGD2Q96BF3 282 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 UPRTQ96BW1 309 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 C10orf35Q96D05 121 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 PELI1Q96FA3 418 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 DNTTIP1Q9H147 329 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 DCLRE1BQ9H816 532 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 INPP5EQ9NRR6 644 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 RASL12Q9NYN1 266 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 NLKQ9UBE8 527 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 SLC7A11Q9UPY5 501 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.59□□□□□ -1.19
SYN3-211ENST00000472027 TLN2Q9Y4G6 2542 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 ARHGAP32A7KAX9 2087 aa7.59□□□□□ -1.19
SYN3-211ENST00000472027 IGHV3OR16-10A0A075B7F0 116 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 LOC107986453A0A1B0GWG9 222 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 OR2AT4A6NND4 320 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 E9PI62 339 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 J3QT63 122 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 NDUFB3O43676 98 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 GATBO75879 557 aaKnown RBP7.58□□□□□ -1.2
SYN3-211ENST00000472027 ECDO95905 644 aaPredicted RBP7.58□□□□□ -1.2
SYN3-211ENST00000472027 ACAA1P09110 424 aaPredicted RBP7.58□□□□□ -1.2
SYN3-211ENST00000472027 PSG2P11465 335 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 GABRA2P47869 451 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 FUT6P51993 359 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 FGF12P61328 243 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 IKZF1Q13422 519 aa7.58□□□□□ -1.2
SYN3-211ENST00000472027 C11orf91Q3C1V1 193 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms