RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 UBE2L3P68036 154 aaKnown RBP6.22□□□□□ -1.41
BRCA1-210ENST00000471181 RPS19BP1Q86WX3 136 aaKnown RBP6.22□□□□□ -1.41
BRCA1-210ENST00000471181 DUSP18Q8NEJ0 188 aa6.22□□□□□ -1.41
BRCA1-210ENST00000471181 PIK3IP1Q96FE7 263 aa6.22□□□□□ -1.41
BRCA1-210ENST00000471181 NIPSNAP1Q9BPW8 284 aa6.22□□□□□ -1.41
BRCA1-210ENST00000471181 GSX2Q9BZM3 304 aa6.22□□□□□ -1.41
BRCA1-210ENST00000471181 ZMIZ1Q9ULJ6 1067 aa6.22□□□□□ -1.41
BRCA1-210ENST00000471181 GPR45Q9Y5Y3 372 aa6.22□□□□□ -1.41
BRCA1-210ENST00000471181 MFSD2BA6NFX1 497 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 K7EQS6 105 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 CXCL13O43927 109 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 SLCO2B1O94956 709 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 MT-CO3P00414 261 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 LPAR6P43657 344 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 TFPI2P48307 235 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF83P51522 516 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 PRDX1Q06830 199 aaKnown RBP6.21□□□□□ -1.41
BRCA1-210ENST00000471181 GUCA2BQ16661 112 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 HFEQ30201 348 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 MEIG1Q5JSS6 88 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 ANKRD34AQ69YU3 496 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 RHBDD2Q6NTF9 364 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 CBARPQ8N350 705 aaPredicted RBP6.21□□□□□ -1.41
BRCA1-210ENST00000471181 CLRN3Q8NCR9 226 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 SLC25A43Q8WUT9 341 aaPredicted RBP6.21□□□□□ -1.41
BRCA1-210ENST00000471181 CCL17Q92583 94 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 SLAMF8Q9P0V8 285 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 CD3DP04234 171 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 BTF3P20290 206 aaKnown RBP6.21□□□□□ -1.41
BRCA1-210ENST00000471181 PRRX1P54821 245 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 RELBQ01201 579 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 COL19A1Q14993 1142 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 MRPL54Q6P161 138 aaKnown RBP6.21□□□□□ -1.41
BRCA1-210ENST00000471181 C8orf44Q96CB5 159 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 RASL11BQ9BPW5 248 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 A4GALTQ9NPC4 353 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 TECRQ9NZ01 308 aaKnown RBP6.21□□□□□ -1.41
BRCA1-210ENST00000471181 OR6C3Q9NZP0 311 aa6.21□□□□□ -1.41
BRCA1-210ENST00000471181 HRO43593 1189 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 C1QBP02746 253 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 SLC35E2P0CK97 266 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 JUNBP17275 347 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-210ENST00000471181 AOAHP28039 575 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 ID1P41134 155 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 TWIST1Q15672 202 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 TOMM34Q15785 309 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-210ENST00000471181 SPANXN1Q5VSR9 72 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 C1QTNF3Q9BXJ4 246 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 CXorf36Q9H7Y0 433 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 THYN1Q9P016 225 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 NAT8Q9UHE5 227 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 SLC45A1Q9Y2W3 748 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 RGPD3A6NKT7 1758 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-210ENST00000471181 RGPD4Q7Z3J3 1758 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 SBF2Q86WG5 1849 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 MAP1LC3B2A6NCE7 125 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 ARNTLO00327 626 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 PPP6CO00743 305 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 GSTZ1O43708 216 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-210ENST00000471181 B3GALT4O96024 378 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 HRASP01112 189 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 TNFRSF1AP19438 455 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 KIR3DL2P43630 455 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 ROM1Q03395 351 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 FAHD2BQ6P2I3 314 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-210ENST00000471181 SLC16A13Q7RTY0 426 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 SLC36A1Q7Z2H8 476 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 KMT5CQ86Y97 462 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 OR52N1Q8NH53 320 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 OIT3Q8WWZ8 545 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 NEIL1Q96FI4 390 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-210ENST00000471181 DERL3Q96Q80 235 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 SMIM14Q96QK8 99 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 MAP1LC3BQ9GZQ8 125 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 IL36GQ9NZH8 169 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 ZFP30Q9Y2G7 519 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 MRPS16Q9Y3D3 137 aaKnown RBP6.21□□□□□ -1.42
BRCA1-210ENST00000471181 TCRBV3S1A0A5B6 114 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 OR2A25A4D2G3 310 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 ZNF253O75346 499 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 TNFSF15O95150 251 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 APELAP0DMC3 54 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 ZNF26P17031 533 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-210ENST00000471181 PNLIPRP2P54317 469 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 MICBQ29980 383 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 ANKRD55Q3KP44 614 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 LGALSLQ3ZCW2 172 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-210ENST00000471181 FGF13Q92913 245 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 EAF1Q96JC9 268 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-210ENST00000471181 GDE1Q9NZC3 331 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 PITPNC1Q9UKF7 332 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 LIPGQ9Y5X9 500 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 KCNMB2Q9Y691 235 aa6.21□□□□□ -1.42
BRCA1-210ENST00000471181 ALX3O95076 343 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 CD74P04233 296 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 ALDOCP09972 364 aaKnown RBP6.2□□□□□ -1.42
BRCA1-210ENST00000471181 MGMTP16455 207 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 LIM2P55344 173 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 RTP5Q14D33 572 aa6.2□□□□□ -1.42
BRCA1-210ENST00000471181 SHBQ15464 509 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms