RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 SAMD4AQ9UPU9 718 aaKnown RBP3.05□□□□□ -1.92
COL11A1-208ENST00000470170 GINS2Q9Y248 185 aa3.05□□□□□ -1.92
COL11A1-208ENST00000470170 SNX10Q9Y5X0 201 aa3.05□□□□□ -1.92
COL11A1-208ENST00000470170 MROH7Q68CQ1 1323 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 ZNF816-ZNF321PA0A0X1KG74 233 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 DISC1C4P0D8 188 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 J3QLI3 93 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 MRPS12O15235 138 aaKnown RBP3.04□□□□□ -1.92
COL11A1-208ENST00000470170 CTNSO60931 367 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 FKBP6O75344 327 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 OR2B3O76000 313 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 TYMSP04818 313 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 CD5P06127 495 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 GUSBP08236 651 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 HIST1H1EP10412 219 aaKnown RBP3.04□□□□□ -1.92
COL11A1-208ENST00000470170 GTF2F2P13984 249 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 RAB5AP20339 215 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 GABRR1P24046 479 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 HTR1FP30939 366 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 DLX6P56179 175 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 TMEM33P57088 247 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 TAS2R31P59538 309 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 RANP62826 216 aaKnown RBP3.04□□□□□ -1.92
COL11A1-208ENST00000470170 RPL32P62910 135 aaKnown RBP3.04□□□□□ -1.92
COL11A1-208ENST00000470170 CD164Q04900 197 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 PRPSAP1Q14558 356 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 GUSBP1Q15486 140 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 TRAM1Q15629 374 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 OR2B11Q5JQS5 317 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 TPTE2P1Q5T6R2 138 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 SAXO2Q658L1 398 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 TRIM40Q6P9F5 258 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 Q6ZT83 130 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 TMEM179Q6ZVK1 233 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 DPPA2Q7Z7J5 298 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 S100A7AQ86SG5 101 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 LYG2Q86SG7 212 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 TMEM150AQ86TG1 271 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 HORMAD1Q86X24 394 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 NIT1Q86X76 327 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 PHF13Q86YI8 300 aaPredicted RBP3.04□□□□□ -1.92
COL11A1-208ENST00000470170 ZNF561Q8N587 486 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 OR2T33Q8NG76 320 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 OR10J5Q8NHC4 309 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 C16orf78Q8WTQ4 265 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 TRUB1Q8WWH5 349 aaKnown RBP3.04□□□□□ -1.92
COL11A1-208ENST00000470170 OR5P2Q8WZ92 322 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 BORCS5Q969J3 196 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 RERGQ96A58 199 aaPredicted RBP3.04□□□□□ -1.92
COL11A1-208ENST00000470170 OXGR1Q96P68 337 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 MS4A4EQ96PG1 132 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 FOXC2Q99958 501 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 ZNF2Q9BSG1 426 aaPredicted RBP3.04□□□□□ -1.92
COL11A1-208ENST00000470170 CDCA4Q9BXL8 241 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 UGT2B28Q9BY64 529 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 TLNRD1Q9H1K6 362 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 CWH43Q9H720 699 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 EXOSC4Q9NPD3 245 aaKnown RBP3.04□□□□□ -1.92
COL11A1-208ENST00000470170 EHFQ9NZC4 300 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 SMPXQ9UHP9 88 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 FBXO5Q9UKT4 447 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 MYO10Q9HD67 2058 aa3.04□□□□□ -1.92
COL11A1-208ENST00000470170 ZFYVE9O95405 1425 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 FLT4P35916 1363 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 KIR2DL5BA0A0G2JN68 375 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 KIR2DL5BA0A0G2JPC4 375 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 SMIM28A0A1B0GU29 152 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 ISPDA4D126 451 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 LOC110117498-PIK3R3F6TDL0 507 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 KRTAP4-16G5E9R7 235 aaPredicted RBP3.03□□□□□ -1.92
COL11A1-208ENST00000470170 GFYI3L273 518 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 M0QZK8 103 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 CDIPTO14735 213 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 RAD51CO43502 376 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 SYNGR1O43759 233 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 RAD1O60671 282 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 NOS1APO75052 506 aaPredicted RBP3.03□□□□□ -1.92
COL11A1-208ENST00000470170 SUPT3HO75486 399 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 AQP8O94778 261 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 WISP3O95389 354 aaPredicted RBP3.03□□□□□ -1.92
COL11A1-208ENST00000470170 ARG1P05089 322 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 OR5AL1P0C617 328 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 LIPCP11150 499 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 KCNE1P15382 129 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 RPS12P25398 132 aaKnown RBP3.03□□□□□ -1.92
COL11A1-208ENST00000470170 CRABP1P29762 137 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 HRH1P35367 487 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 GABRA4P48169 554 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 SULT1A1P50225 295 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 SULT1A2P50226 295 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 AQP5P55064 265 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 FLI1Q01543 452 aaPredicted RBP3.03□□□□□ -1.92
COL11A1-208ENST00000470170 ACVR1Q04771 509 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 DAZ2Q13117 558 aaKnown RBP3.03□□□□□ -1.92
COL11A1-208ENST00000470170 GGTLC2Q14390 218 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 ZNF630Q2M218 657 aaPredicted RBP3.03□□□□□ -1.92
COL11A1-208ENST00000470170 TMEM52BQ4KMG9 183 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 BRMS1LQ5PSV4 323 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 CST9Q5W186 159 aa3.03□□□□□ -1.92
COL11A1-208ENST00000470170 ZNF57Q68EA5 555 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms