RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 NDNFQ8TB73 568 aa9.48□□□□□ -0.89
LSM2-209ENST00000470083 BCAS4Q8TDM0 211 aa9.48□□□□□ -0.89
LSM2-209ENST00000470083 SGK3Q96BR1 496 aa9.48□□□□□ -0.89
LSM2-209ENST00000470083 RBM14Q96PK6 669 aaKnown RBP9.48□□□□□ -0.89
LSM2-209ENST00000470083 ERMAPQ96PL5 475 aaPredicted RBP9.48□□□□□ -0.89
LSM2-209ENST00000470083 FGF23Q9GZV9 251 aaPredicted RBP9.48□□□□□ -0.89
LSM2-209ENST00000470083 C1orf21Q9H246 121 aa9.48□□□□□ -0.89
LSM2-209ENST00000470083 RABEP2Q9H5N1 569 aa9.48□□□□□ -0.89
LSM2-209ENST00000470083 LYVE1Q9Y5Y7 322 aa9.48□□□□□ -0.89
LSM2-209ENST00000470083 TMEM120BA0PK00 339 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 RFPL4AA6NLU0 287 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 RFPL4AL1F8VTS6 287 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 M0QZK8 103 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 SLC1A7O00341 560 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 LY86O95711 162 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 SNRNP70P08621 437 aaKnown RBP9.47□□□□□ -0.89
LSM2-209ENST00000470083 FRMD6-AS1P0C7T7 363 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 ZNF728P0DKX0 622 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 HIST1H1CP16403 213 aaKnown RBP9.47□□□□□ -0.89
LSM2-209ENST00000470083 SELENOWP63302 87 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 PRDX4Q13162 271 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 TAF13Q15543 124 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 ERICH5Q6P6B1 374 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 DCXRQ7Z4W1 244 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 CD177Q8N6Q3 437 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 OR4K13Q8NH42 304 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 HPSE2Q8WWQ2 592 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 RNF170Q96K19 258 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 ANKRD19PQ9H560 264 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 TBC1D23Q9NUY8 699 aa9.47□□□□□ -0.89
LSM2-209ENST00000470083 OR6C68A6NDL8 312 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 ZNF850A8MQ14 1090 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 ARPC3O15145 178 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 CST4P01036 141 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 ANXA2P07355 339 aaKnown RBP9.46□□□□□ -0.9
LSM2-209ENST00000470083 PSKH1P11801 424 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 PIPP12273 146 aaPredicted RBP9.46□□□□□ -0.9
LSM2-209ENST00000470083 CD24P25063 80 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 KDELR2P33947 212 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 SMIM21Q3B7S5 101 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 C9orf152Q5JTZ5 239 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 NANOGP8Q6NSW7 305 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 SMARCD3Q6STE5 483 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 EGFL6Q8IUX8 553 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 COMMD1Q8N668 190 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 OR4Q3Q8NH05 313 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 CHPT1Q8WUD6 406 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 SLAMF6Q96DU3 332 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 RBMXL1Q96E39 390 aaKnown RBP9.46□□□□□ -0.9
LSM2-209ENST00000470083 TM2D3Q9BRN9 247 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 FN3KQ9H479 309 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 CENPMQ9NSP4 180 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 RASL12Q9NYN1 266 aa9.46□□□□□ -0.9
LSM2-209ENST00000470083 ZNF878C9JN71 531 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 SLC22A2O15244 555 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 PRDX2P32119 198 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 BRS3P32247 399 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 OMPP47874 163 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 CX3CR1P49238 355 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 GPM6AP51674 278 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 ACTA2P62736 377 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 VSNL1P62760 191 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 GRB2P62993 217 aaKnown RBP9.45□□□□□ -0.9
LSM2-209ENST00000470083 ACTG2P63267 376 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 ACTC1P68032 377 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 ACTA1P68133 377 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 GFOD2Q3B7J2 385 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 PRSS45Q7RTY3 260 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 VTCN1Q7Z7D3 282 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 OR8J3Q8NGG0 315 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 OR8U1Q8NH10 309 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 ZNF671Q8TAW3 534 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 TSPEARQ8WU66 669 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 STMN2Q93045 179 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 SH3GL1Q99961 368 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 TMEM120AQ9BXJ8 343 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 OR51I2Q9H344 312 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 RGCCQ9H4X1 137 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 KIAA1109Q2LD37 5005 aa9.45□□□□□ -0.9
LSM2-209ENST00000470083 IGHV2-26A0A0B4J1V2 119 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 UNC119BA6NIH7 251 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 DNAJC8O75937 253 aaPredicted RBP9.44□□□□□ -0.9
LSM2-209ENST00000470083 TK1P04183 234 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 ACKR3P25106 362 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 HTR1DP28221 377 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 SLC15A1P46059 708 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 ARHGDIBP52566 201 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 CYLC2Q14093 348 aaPredicted RBP9.44□□□□□ -0.9
LSM2-209ENST00000470083 SNAPC1Q16533 368 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 ZNF260Q3ZCT1 412 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 FGD3Q5JSP0 725 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 ACP7Q6ZNF0 438 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 LHFPL2Q6ZUX7 228 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 FAM57BQ71RH2 274 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 ZDHHC23Q8IYP9 409 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 OR4P4Q8NGL7 312 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 FANK1Q8TC84 345 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 NOL4LQ96MY1 436 aaPredicted RBP9.44□□□□□ -0.9
LSM2-209ENST00000470083 C7orf26Q96N11 449 aa9.44□□□□□ -0.9
LSM2-209ENST00000470083 CDRT15Q96T59 188 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms